KEGG   Medicago truncatula (barrel medic): 11411169
Entry
11411169          CDS       T01716                                 
Name
(RefSeq) probable splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    11411169
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mtr03041]
    11411169
Spliceosome [BR:mtr03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    11411169
 Complex B
    11411169
 Complex C
   U2 SnRNP specific factors
    11411169
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin DUF2849 Endotoxin_M
Other DBs
NCBI-GeneID: 11411169
NCBI-ProteinID: XP_003631017
UniProt: G7LCC6
LinkDB
Position
8:48977118..48982262
AA seq 804 aa
MMLGSLPILPLPAPPTDGNLGPLPEAQLTQEEVEERNESSSIEEAAPTSVATHTRTIGII
HPPPDIRNIVDKTSQFVAKNGLEFEKRIIASNAGNAKFNFLNPSDPYHAYYQHRLSEFRS
QNQSSTQQPGDSALLESGPPAPETDSNDVATTEKPDISAQFKPVRKVLDPPEAEQYTVRL
PEGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFMKPTHSMFTFFTSLADAY
SKVLMPPKGLTEKLKKSVPDMTTVLERCVNRLEWERSQEQARQKAEDEIEQERIQMAMID
WHDFVVVESIDFADDEDEELPPPMTLEEVIRRSKMTPMEEDTVEPGKEVEMEMDEEEAQL
VKEGMDAVDDDEGKKSEIRVTEDPEPPIRIVKNWKRPEDRLPADRDSTKFVVSPITGELI
PISEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISKNIVGLARTRPDIFGTTEE
EVSNAVKAEIEKKNDEQPKQVIWDGHSGSIGRTANQAMSQNIGSEDQNDAYNNESKNLPG
PAAPPPRPGMPSVRPLPPPPGLALNLPRGLMHNMQYSNPNSIGLPMPPPRPGMHMMQSLR
PAPPPPMQMPGGQHSMMGGQPPPMHPSISMNNQGIPIPPPPGSQFTPVPRPYAPHPHPSS
GMMPMMHPPPPPQGVPPPPPPEEAPPPLPEEPEPKRQKHDDSALIPEDKFLAQHPGPARI
SISVPNVDEGNLKGQVLEITVQSLSETVGSLKEKIAGEIQLPANKQKLSGKPGFLKDNMS
LAHYNVSGGETLSLALRERGGRKR
NT seq 2415 nt   +upstreamnt  +downstreamnt
atgatgctaggttcattacctatactccctctacccgctcctcccactgatggaaatctt
ggtcctctccccgaggctcaactcactcaagaggaggtggaggagaggaatgagagttcc
tccatcgaggaagcagcaccgacatctgttgccacacacactagaactattggaataatt
cacccccctccagacattagaaacattgttgataaaacctctcagttcgttgctaagaat
ggtcttgaatttgaaaagaggattattgctagtaatgcgggcaatgccaagtttaatttc
ctcaatccatccgatccctatcatgcatattatcagcacaggctttctgagtttcgtagt
cagaatcaatcttctactcaacaaccaggggattctgctctactggaatcaggtccacct
gcgccggaaactgatagtaatgatgtagcaactacagagaagcctgatatttccgcccag
tttaaaccagtaaggaaagtacttgatcctcccgaggctgagcagtatacagttaggctt
cctgaaggcattacaggagaggagctggatattataaagcttacagcacaatttgtggct
cgtaacgggaaatcctttttgacaggattgacaagtagggagattaataacccccaattt
catttcatgaaaccaactcacagcatgtttacatttttcacttcccttgccgatgcatat
tcaaaggttttgatgcctccaaaggggttgacagagaagctaaaaaagagtgtacccgac
atgactaccgtgcttgaaagatgtgtgaataggctggaatgggagcgttcacaagagcaa
gctaggcaaaaggctgaagatgagatagagcaagaaagaatacaaatggctatgattgat
tggcatgattttgtggtggttgaatcaatagattttgctgacgatgaggatgaagaatta
cctcctccgatgacccttgaagaggttataaggagaagcaagatgactcccatggaagaa
gataccgttgagccagggaaggaagtagaaatggaaatggacgaggaagaggcccagctt
gttaaagagggaatggatgctgttgacgatgatgaagggaagaagagtgaaatcagggtt
actgaagaccctgaaccaccgattaggattgtgaagaactggaagagaccagaagacagg
cttcctgcagatagagattcaaccaagtttgtggtttctcctatcaccggtgaactgatt
cctattagtgaaatgtcagaacatatgcgaatttctctcattgatcctaagtacaaagaa
cagaaagaaagaatgtttgccaaaattcgagaaaccactttggcacaggatgatgaaatc
tcaaaaaacattgttggacttgctcggactcgtcctgatatttttggtactaccgaggaa
gaggtttccaatgctgttaaggctgaaattgagaagaaaaatgatgagcaacctaagcag
gttatatgggatggtcacagcggtagtattggccgtactgcaaaccaagcaatgtcacag
aatattggaagtgaggatcaaaatgatgcttataataatgaatctaaaaacctccctggt
cctgctgcacctcctccaagacctggtatgccttcagttcgtcctcttccgccaccacct
ggactagctttgaatctaccccgtgggcttatgcataacatgcaatattctaatcctaat
agcattggccttccgatgcctccaccaagaccaggcatgcacatgatgcaatctctccgg
cctgcccctcctcctccaatgcagatgcctggtggacaacattccatgatgggtggtcaa
ccacccccaatgcatccatcaatttctatgaataaccaaggaattcccattcctccacca
cctggatctcagttcactcctgttccaagaccttatgctcctcaccctcatccatcatca
gggatgatgcctatgatgcatccaccacctccgcctcaaggagtgcccccaccgccgcca
cctgaggaagctcctcccccgcttccagaggaaccagaaccgaagaggcagaaacatgac
gattctgctctgatccctgaggataaatttctggctcaacatccgggacctgctcggatc
agtatatctgttcctaatgttgatgaaggaaatctcaaaggacaagttctggaaataact
gtgcaatctctgtctgaaactgttggcagcctgaaggaaaaaattgctggggagatccaa
ctccctgctaacaagcagaaattgagtggaaaaccaggctttctcaaggacaatatgtca
cttgcacattacaatgttagtggaggagaaacactctccctagccttgagagagcgtggt
ggtagaaagagatga

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