KEGG   Medicago truncatula (barrel medic): 11418624
Entry
11418624          CDS       T01716                                 
Name
(RefSeq) nuclear-pore anchor
  KO
K09291  nucleoprotein TPR
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    11418624
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mtr03019]
    11418624
Messenger RNA biogenesis [BR:mtr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     11418624
SSDB
Motif
Pfam: TPR_MLP1_2 TMF_TATA_bd
Other DBs
NCBI-GeneID: 11418624
NCBI-ProteinID: XP_003595922
UniProt: G7IT80
LinkDB
Position
2:complement(32348157..32379848)
AA seq 2095 aa
MPLFISDEDLHRLSGDSTAVAAKADAFIRNLLNELDTIRAKADASDINAEQNCSLVEQKY
LSLSAEFSKLESHAVNLQSTLDQHVRDLDDAKAKNHQFHLQLVEKDREVERLRTEVSELH
KSKRQLIELNEQKDLELSEKNTTIRSYLDKIVHLTENASHKEARISEVEAELGRCRAACT
RLEQEKEIVERQNAWLNEELTAKINSFLEMRRKHTESETDISSKLADVERQFSECSKSLQ
WNKDKVRELEMKLKSTQEELISAKGDAAANEEQLSAELSTVNKLNELYKESSEEWSRKAA
DLEGVIKAMESQLKQVEDDYKDRLEKEFSARKQFEKEAADLKEKLEKCEAEIETSKKMNA
LSNLPLQSFSTEPWMTAIVTDNMDEENNALVSKIPVGVSGTALAASLLRDGWSLAKMYAK
YQEAVDALRHEQLGRKESESILQRVLNELEGKAEAIEDERVEHDKMADAYSLMNQKLQHS
LNENSNLEKAILELKADLKRHEREYNLAQKEIDDLRKQVTVLLKECQDIQVRCGSFGNNI
NANATNISSRTNTATDAESIISQHLLTFKDINELVEQNVQLRSLVRSLYEQFENQKVEFK
ENLEMELKKHTEEAASKVAAVLQRAEEQGQMIESLHTSVAMYKRLYEEEHSLHLSHTHSS
EALAAAAEVGRNNVNTSIESSQEIAKKSLEKAAERVRCLEDELAKSRSEIIVLRSERDKI
ALEGNFVRERLDSFMKEFEYQKAEAKGVLARNVEFSQLVVDYQRKLRESSESMSAAEELS
RKLSMELSALKNEKEVLSNAEKRASDEVRNLSERVYRLQATLGTIQSAEEVREEARVAER
VKQEEHTKQLEREWAEAKKELQEERENVRRLALDRDQTMKNSLRQVEDMSKELTNALGAL
ASAESRAAVAEAKLSSIQKQMSSTDGQLVNTESVSGSSILSRDEVVAELQTAKEEIEKLK
EEVHANKAHMLQYKSIAEVNEDALKQIESAHEDYKIEVDNTKKSLEAELNSLREKISELE
KEASLKSDEVVSATAGKEEALTSALAEITHLKEEILTKTSQISEMEVQISGLKEHLDKEH
QKWRAAQTNYERQVVLQSETIQELTKTSETLALLQEEASKLRKLADAQKIENNELKARWE
EEKARLEKSKCDAEKKYDEINEQNKILHSQLEALHIQWAEKERNAAGISPGSRGDTFGDA
GLQNVVNYLRRSKEIAETEVSLLKQEKLRLQSQLESALKSAESAHASLEAQRVKSRSFMF
TEEEIKSLQLQVREMNLLRESNMQLREENKHNFEECQKLRELAEQARTARDNLENLVRER
ESELEGQKKEIETLKTEKEHLNYKVSELLERCKNVDAEDYDRVKKLVQDLQGKLRDRDAQ
IEETSKILSEKQESFSRLEQDLSNCRLELVEKEKRINEIPKIEANHKQDVDKNRKLLAHF
KRRIEALNTEKEELVKENQQLSGQLNKEKEELGKENQQLSRQLDEIKQQGKRSTGDTAGE
QAMNQEKDTRIQMLERTLERVRADLNKEKEDKTAERNRRLKNEKAIADSYKNIDLERKQF
VNDLERHKEALKRLSDEVEKLKTLVGNLPEGTNAAQLLSRSNVDDFSAPYMAAVENFEKE
AHAVCVTLGDPSTITDSSAAATGSLVHTQPPSILPSTAPVTSSLPPKATGESEKRLALTK
SSNETRKTGRRLVRPRLVKPDEPQGDTEMSDAEGLGGNKPGPSSDAETQSNFGTSSQPVA
RKRVAPTSTSELREESSAPGEKSSDVAAPALKKPKGSEFPEDSGEEQPATTPEFTCSHPV
AEESFESGELPQGQNEEVGEAQNDDENAVGKDEESEDPPNMDGSGQEELQDDKTGVSEEN
LDQPTETQMVSDEMQRDHTEIDNQQSTLPLSSETEEGEMLPEAGDPEGGFDGSNMENQES
REATPEPSPARVDDDDALEAGEINSPEISTDDKNDEGDLAEDAADGSDKLADVNKATSVE
SDQVVEPAPVASESNLQSSVAESSSSKLPVSKQGATRSPSKTEDVKPTSPVKPTSPISDM
STTTTINLQERARERAQLRQAGQAGVFSTTARGRGRIPRGRVVRGRGRRPPSSDA
NT seq 6288 nt   +upstreamnt  +downstreamnt
atgcccctctttatctccgacgaagacctccaccgcctctccggcgactccaccgccgtt
gccgccaaagccgacgccttcattcgcaacctcctcaacgaactcgacactatccgcgcc
aaagccgatgcctccgacatcaacgccgagcagaattgctctctcgttgaacagaagtat
ctctccctctccgctgagttctctaagcttgaatcgcatgctgtgaatcttcaatcgact
cttgatcaacatgttcgtgatctcgatgatgcgaaagcgaagaatcaccaatttcacttg
caattggtcgagaaggatagagaggtagagaggttgaggacggaggtgagtgagctgcac
aagtcaaagaggcaattgattgagttgaatgaacagaaggatctggagcttagtgagaag
aacacaaccatcaggagttaccttgataaaattgttcatttgacggaaaatgcgtcccat
aaggaggcacgcattagtgaagttgaggcggaattggggagatgccgggctgcttgcact
cgcctcgagcaggagaaggagattgttgagaggcaaaatgcttggcttaatgaggagttg
actgctaaaatcaacagtttcttagagatgcgtagaaaacatacagaatcggagaccgat
atatcttccaaacttgcagatgttgaaagacaattcagtgaatgctctaaatctctacaa
tggaataaggataaagtaagggagctagaaatgaagctgaagtctacgcaagaggaatta
atatcagctaaaggtgacgctgcagccaacgaagagcaattatctgctgaactttcaact
gtcaacaagcttaatgagctctacaaagagagttctgaggaatggtcaagaaaagcagcg
gacctagagggtgttataaaagcgatggagtcacagctaaagcaagttgaagatgattat
aaagacagacttgagaaggaattttctgctagaaagcagtttgaaaaggaggctgctgac
ttgaaagaaaagctagagaagtgcgaagctgaaattgagacaagcaagaagatgaatgca
ctaagcaatcttccacttcaaagcttctccactgaaccgtggatgacagctattgtaact
gataacatggatgaagaaaataatgcactagtctcaaaaattcctgttggggtttcggga
acagcattagctgcttcacttttgcgagatgggtggagtttggcgaagatgtatgcaaaa
taccaagaggctgttgatgctttgagacacgaacaattgggaaggaaggagtcagagtca
attttgcaacgggtcctaaacgaattggaagggaaggcagaagccatagaagatgagaga
gtggaacatgacaagatggctgatgcatactctttgatgaaccaaaagctgcaacattcc
ctcaacgaaaattccaacttagagaaagccatcctggaactgaaggctgacctcaaaagg
catgaacgtgaatataatcttgcccagaaagaaattgatgaccttcgaaaacaggtgaca
gtacttttgaaagaatgccaagacatacaagttcgttgtgggtcatttggtaacaatatc
aatgctaatgcaacaaatatttcttcaagaacaaatacagcgaccgatgctgaaagtatc
atatcacagcaccttttaactttcaaggacattaatgaattagttgagcagaatgtccaa
ctcagaagccttgtacgcagtctctatgaacagtttgaaaatcagaaggtggagttcaag
gaaaatcttgaaatggaactcaaaaaacatacagaagaggctgcttctaaagttgcggct
gttctgcagagagcggaagaacaagggcagatgattgaatcgcttcatacatctgtcgca
atgtataaaaggttgtatgaggaggagcatagtcttcatttatctcacacccattcttca
gaagctcttgcagctgctgcagaagttggaagaaacaacgtcaatacttcaattgaaagt
tcacaggaaattgctaagaagtctcttgaaaaagctgcagagcgtgtaagatgtcttgag
gatgaattagcaaaatctaggagtgagattattgtattacgatcagagcgtgacaaaatt
gcactagaaggaaattttgttagagagcggcttgatagctttatgaaggaatttgaatac
cagaaagctgaagcaaaaggcgttttggcaagaaatgtggagttttctcagctagttgta
gattaccaacggaaattgcgggaaagttcagagtcaatgagtgctgctgaggagctatcg
cggaaactttctatggagttgtcggcattaaagaatgaaaaggaagttttatcaaatgct
gaaaagagagcatctgacgaggttcgcaatttatctgaaagggtgtatcgcttgcaggct
actttgggtaccattcaaagtgctgaagaagttagagaggaagcaagagttgcagagagg
gtaaaacaagaagaacatacaaagcaattggagagggaatgggccgaagccaagaaagag
ttacaggaagagagagaaaatgtgcggagacttgcgcttgatcgggaccagaccatgaaa
aattctctgagacaggttgaggatatgagcaaagagttaactaatgcactgggtgcactt
gcgtctgcagaatctagggctgctgtcgctgaggcaaaactctcaagtattcagaaacaa
atgagttccacagatgggcagcttgtcaatacggaatcagtgagtggatcttccatttta
tccagagatgaggttgttgctgaattgcaaacagcaaaagaagagattgagaaactgaaa
gaggaagtacatgctaacaaagcacacatgctgcagtataagagcattgctgaggtgaat
gaagatgcattgaaacaaatagaaagtgcacacgaggactacaagatagaggttgacaat
acaaagaaatctctagaggctgaactgaattcacttagagagaagatttcagagcttgaa
aaggaagctagtttgaaatctgatgaggttgtatctgcaactgctggaaaagaagaggct
ctgacatctgctttggctgagataacacatcttaaagaagaaattttaaccaaaacttct
caaatctcagaaatggaagttcagatatctggtttaaaagaacacctggacaaagagcat
cagaaatggcgtgcagctcaaacgaattacgaaagacaggttgttctccagtcagagact
attcaggagttgactaaaacatctgaaacactagccttgctgcaggaggaagcatctaaa
ttacgtaaattagctgatgctcagaaaattgaaaataatgaactaaaggctaggtgggaa
gaggagaaagcaagactagagaagtctaagtgtgatgctgaaaagaaatatgatgaaata
aatgagcagaataaaatcttacacagccaacttgaggcgttgcatattcaatgggctgag
aaggagcgcaatgctgctggtatttcacctggaagtaggggtgatacatttggtgatgct
ggccttcaaaacgttgtgaactatctccgccgttcaaaagaaattgcagaaacagaagtt
tcattattaaaacaggaaaagctgcgattacagtcacagcttgagagtgctttgaagtca
gcagaatctgctcatgcatctctagaagctcagcgtgtaaaatcaagatcatttatgttt
actgaagaagaaatcaaatccttacaacttcaggtcagggaaatgaacttgcttcgtgag
agtaatatgcagctcagggaagaaaataagcacaattttgaggaatgtcagaaattgcgt
gaactagcagaacaggcaagaactgccagagataatctagagaatcttgtaagggaaaga
gaaagtgaactggaaggccagaaaaaagagattgaaacactaaaaacggaaaaggaacat
ctcaattacaaggtttcagagttgcttgaaaggtgtaaaaatgttgatgcggaggattat
gatcgagtgaagaaacttgtacaagatttgcagggtaaactaagagacagggatgctcag
attgaggaaactagtaaaattctttcagaaaaacaggaatctttttcacgtttagagcaa
gacctttcaaactgcagattggaacttgtggaaaaagagaagagaattaatgaaattcca
aaaattgaggctaaccataaacaggatgtggataagaataggaaactgctggcccatttt
aagagaaggattgaggcattaaatacggaaaaggaagagctggtgaaagagaatcagcaa
ctttctggacagttaaataaggaaaaggaagagctagggaaagagaatcagcagctttct
agacagttagatgaaattaaacaacaagggaaaagatcaacaggtgatacagctggtgaa
caagcgatgaatcaagaaaaggacaccagaatacagatgctggaaagaactctggagaga
gtgagagctgacttaaacaaggagaaggaagacaaaactgcggagagaaataggcgactg
aaaaatgaaaaggccatagcggactcttacaaaaatattgacctggagagaaaacagttt
gttaatgacctcgagaggcataaggaggcgctgaagcgattgtctgatgaagttgaaaag
cttaagactcttgttggtaatcttcctgagggaaccaatgctgctcaacttctttcgaga
tccaatgttgatgacttctctgctccttatatggctgctgttgaaaattttgaaaaggaa
gctcatgcagtatgtgtcactcttggtgatccatcaacaattacagatagctcagcagct
gctacaggttctctggtccacactcaacctccaagcatattaccctcaacggcccctgtg
acaagcagtttaccacctaaggccactggagaaagtgagaaaaggcttgcactgacgaaa
tctagtaatgaaactcgtaaaactggtaggagactggtcaggccacgactagtaaagcca
gatgaaccacaaggggacactgaaatgtctgatgctgaaggacttgggggcaacaaacct
ggaccttctagtgacgcagaaacccaaagcaattttggtacatcatctcaaccagtggct
cggaaacgtgttgctcccacctcaacatctgagttgcgtgaagaatcttcggcacctggt
gagaagagctctgatgtagcagcacctgcgttaaagaagcccaaaggatctgagtttcca
gaagacagcggcgaagaacaacctgctacaaccccagaattcacttgcagtcatccagtt
gctgaagaatcatttgaaagtggtgagttgccacaaggccaaaatgaggaagtaggtgag
gctcaaaatgatgatgagaatgctgtggggaaggacgaagaatccgaagatccaccaaac
atggatggttctggtcaagaggaattacaagatgacaagactggagtttcagaagagaat
ctggatcaaccaacagaaacacaaatggtgtctgatgagatgcagagggatcatactgag
atagacaaccagcaatcaacattgcctctcagtagtgagacagaagagggagagatgttg
ccagaagccggagatcctgagggtggttttgatggatctaacatggaaaaccaagaatct
cgggaggcaactcctgaaccttccccagctagggttgatgatgatgatgctttagaggct
ggtgagattaattcgcctgagatttcaaccgatgataagaatgatgaaggtgacttggct
gaggatgctgctgatggatctgataaattagctgatgttaacaaagcaacatcagttgag
agtgatcaggtggttgagcctgcacctgtcgcgagcgagagtaatttgcagagtagcgtt
gcagaaagtagttcctcaaaattacctgtttcaaagcaaggggcgacgaggtctccctct
aaaacagaagacgtaaagccaacatcacccgtaaagccaacatcaccaattagtgatatg
tcaactacaactaccattaatttacaagagcgagcccgagagagagctcaattgagacaa
gctggacaagctggggtgttttccaccacagcaagaggtcgcggcagaattccccgtggt
cgggttgttcgaggtcgtggtcgcagaccaccatctagtgatgcatga

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