Medicago truncatula (barrel medic): 11418624
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Entry
11418624 CDS
T01716
Name
(RefSeq) nuclear-pore anchor
KO
K09291
nucleoprotein TPR
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
11418624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11418624
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
11418624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
TMF_TATA_bd
Motif
Other DBs
NCBI-GeneID:
11418624
NCBI-ProteinID:
XP_003595922
UniProt:
G7IT80
LinkDB
All DBs
Position
2:complement(32348157..32379848)
Genome browser
AA seq
2095 aa
AA seq
DB search
MPLFISDEDLHRLSGDSTAVAAKADAFIRNLLNELDTIRAKADASDINAEQNCSLVEQKY
LSLSAEFSKLESHAVNLQSTLDQHVRDLDDAKAKNHQFHLQLVEKDREVERLRTEVSELH
KSKRQLIELNEQKDLELSEKNTTIRSYLDKIVHLTENASHKEARISEVEAELGRCRAACT
RLEQEKEIVERQNAWLNEELTAKINSFLEMRRKHTESETDISSKLADVERQFSECSKSLQ
WNKDKVRELEMKLKSTQEELISAKGDAAANEEQLSAELSTVNKLNELYKESSEEWSRKAA
DLEGVIKAMESQLKQVEDDYKDRLEKEFSARKQFEKEAADLKEKLEKCEAEIETSKKMNA
LSNLPLQSFSTEPWMTAIVTDNMDEENNALVSKIPVGVSGTALAASLLRDGWSLAKMYAK
YQEAVDALRHEQLGRKESESILQRVLNELEGKAEAIEDERVEHDKMADAYSLMNQKLQHS
LNENSNLEKAILELKADLKRHEREYNLAQKEIDDLRKQVTVLLKECQDIQVRCGSFGNNI
NANATNISSRTNTATDAESIISQHLLTFKDINELVEQNVQLRSLVRSLYEQFENQKVEFK
ENLEMELKKHTEEAASKVAAVLQRAEEQGQMIESLHTSVAMYKRLYEEEHSLHLSHTHSS
EALAAAAEVGRNNVNTSIESSQEIAKKSLEKAAERVRCLEDELAKSRSEIIVLRSERDKI
ALEGNFVRERLDSFMKEFEYQKAEAKGVLARNVEFSQLVVDYQRKLRESSESMSAAEELS
RKLSMELSALKNEKEVLSNAEKRASDEVRNLSERVYRLQATLGTIQSAEEVREEARVAER
VKQEEHTKQLEREWAEAKKELQEERENVRRLALDRDQTMKNSLRQVEDMSKELTNALGAL
ASAESRAAVAEAKLSSIQKQMSSTDGQLVNTESVSGSSILSRDEVVAELQTAKEEIEKLK
EEVHANKAHMLQYKSIAEVNEDALKQIESAHEDYKIEVDNTKKSLEAELNSLREKISELE
KEASLKSDEVVSATAGKEEALTSALAEITHLKEEILTKTSQISEMEVQISGLKEHLDKEH
QKWRAAQTNYERQVVLQSETIQELTKTSETLALLQEEASKLRKLADAQKIENNELKARWE
EEKARLEKSKCDAEKKYDEINEQNKILHSQLEALHIQWAEKERNAAGISPGSRGDTFGDA
GLQNVVNYLRRSKEIAETEVSLLKQEKLRLQSQLESALKSAESAHASLEAQRVKSRSFMF
TEEEIKSLQLQVREMNLLRESNMQLREENKHNFEECQKLRELAEQARTARDNLENLVRER
ESELEGQKKEIETLKTEKEHLNYKVSELLERCKNVDAEDYDRVKKLVQDLQGKLRDRDAQ
IEETSKILSEKQESFSRLEQDLSNCRLELVEKEKRINEIPKIEANHKQDVDKNRKLLAHF
KRRIEALNTEKEELVKENQQLSGQLNKEKEELGKENQQLSRQLDEIKQQGKRSTGDTAGE
QAMNQEKDTRIQMLERTLERVRADLNKEKEDKTAERNRRLKNEKAIADSYKNIDLERKQF
VNDLERHKEALKRLSDEVEKLKTLVGNLPEGTNAAQLLSRSNVDDFSAPYMAAVENFEKE
AHAVCVTLGDPSTITDSSAAATGSLVHTQPPSILPSTAPVTSSLPPKATGESEKRLALTK
SSNETRKTGRRLVRPRLVKPDEPQGDTEMSDAEGLGGNKPGPSSDAETQSNFGTSSQPVA
RKRVAPTSTSELREESSAPGEKSSDVAAPALKKPKGSEFPEDSGEEQPATTPEFTCSHPV
AEESFESGELPQGQNEEVGEAQNDDENAVGKDEESEDPPNMDGSGQEELQDDKTGVSEEN
LDQPTETQMVSDEMQRDHTEIDNQQSTLPLSSETEEGEMLPEAGDPEGGFDGSNMENQES
REATPEPSPARVDDDDALEAGEINSPEISTDDKNDEGDLAEDAADGSDKLADVNKATSVE
SDQVVEPAPVASESNLQSSVAESSSSKLPVSKQGATRSPSKTEDVKPTSPVKPTSPISDM
STTTTINLQERARERAQLRQAGQAGVFSTTARGRGRIPRGRVVRGRGRRPPSSDA
NT seq
6288 nt
NT seq
+upstream
nt +downstream
nt
atgcccctctttatctccgacgaagacctccaccgcctctccggcgactccaccgccgtt
gccgccaaagccgacgccttcattcgcaacctcctcaacgaactcgacactatccgcgcc
aaagccgatgcctccgacatcaacgccgagcagaattgctctctcgttgaacagaagtat
ctctccctctccgctgagttctctaagcttgaatcgcatgctgtgaatcttcaatcgact
cttgatcaacatgttcgtgatctcgatgatgcgaaagcgaagaatcaccaatttcacttg
caattggtcgagaaggatagagaggtagagaggttgaggacggaggtgagtgagctgcac
aagtcaaagaggcaattgattgagttgaatgaacagaaggatctggagcttagtgagaag
aacacaaccatcaggagttaccttgataaaattgttcatttgacggaaaatgcgtcccat
aaggaggcacgcattagtgaagttgaggcggaattggggagatgccgggctgcttgcact
cgcctcgagcaggagaaggagattgttgagaggcaaaatgcttggcttaatgaggagttg
actgctaaaatcaacagtttcttagagatgcgtagaaaacatacagaatcggagaccgat
atatcttccaaacttgcagatgttgaaagacaattcagtgaatgctctaaatctctacaa
tggaataaggataaagtaagggagctagaaatgaagctgaagtctacgcaagaggaatta
atatcagctaaaggtgacgctgcagccaacgaagagcaattatctgctgaactttcaact
gtcaacaagcttaatgagctctacaaagagagttctgaggaatggtcaagaaaagcagcg
gacctagagggtgttataaaagcgatggagtcacagctaaagcaagttgaagatgattat
aaagacagacttgagaaggaattttctgctagaaagcagtttgaaaaggaggctgctgac
ttgaaagaaaagctagagaagtgcgaagctgaaattgagacaagcaagaagatgaatgca
ctaagcaatcttccacttcaaagcttctccactgaaccgtggatgacagctattgtaact
gataacatggatgaagaaaataatgcactagtctcaaaaattcctgttggggtttcggga
acagcattagctgcttcacttttgcgagatgggtggagtttggcgaagatgtatgcaaaa
taccaagaggctgttgatgctttgagacacgaacaattgggaaggaaggagtcagagtca
attttgcaacgggtcctaaacgaattggaagggaaggcagaagccatagaagatgagaga
gtggaacatgacaagatggctgatgcatactctttgatgaaccaaaagctgcaacattcc
ctcaacgaaaattccaacttagagaaagccatcctggaactgaaggctgacctcaaaagg
catgaacgtgaatataatcttgcccagaaagaaattgatgaccttcgaaaacaggtgaca
gtacttttgaaagaatgccaagacatacaagttcgttgtgggtcatttggtaacaatatc
aatgctaatgcaacaaatatttcttcaagaacaaatacagcgaccgatgctgaaagtatc
atatcacagcaccttttaactttcaaggacattaatgaattagttgagcagaatgtccaa
ctcagaagccttgtacgcagtctctatgaacagtttgaaaatcagaaggtggagttcaag
gaaaatcttgaaatggaactcaaaaaacatacagaagaggctgcttctaaagttgcggct
gttctgcagagagcggaagaacaagggcagatgattgaatcgcttcatacatctgtcgca
atgtataaaaggttgtatgaggaggagcatagtcttcatttatctcacacccattcttca
gaagctcttgcagctgctgcagaagttggaagaaacaacgtcaatacttcaattgaaagt
tcacaggaaattgctaagaagtctcttgaaaaagctgcagagcgtgtaagatgtcttgag
gatgaattagcaaaatctaggagtgagattattgtattacgatcagagcgtgacaaaatt
gcactagaaggaaattttgttagagagcggcttgatagctttatgaaggaatttgaatac
cagaaagctgaagcaaaaggcgttttggcaagaaatgtggagttttctcagctagttgta
gattaccaacggaaattgcgggaaagttcagagtcaatgagtgctgctgaggagctatcg
cggaaactttctatggagttgtcggcattaaagaatgaaaaggaagttttatcaaatgct
gaaaagagagcatctgacgaggttcgcaatttatctgaaagggtgtatcgcttgcaggct
actttgggtaccattcaaagtgctgaagaagttagagaggaagcaagagttgcagagagg
gtaaaacaagaagaacatacaaagcaattggagagggaatgggccgaagccaagaaagag
ttacaggaagagagagaaaatgtgcggagacttgcgcttgatcgggaccagaccatgaaa
aattctctgagacaggttgaggatatgagcaaagagttaactaatgcactgggtgcactt
gcgtctgcagaatctagggctgctgtcgctgaggcaaaactctcaagtattcagaaacaa
atgagttccacagatgggcagcttgtcaatacggaatcagtgagtggatcttccatttta
tccagagatgaggttgttgctgaattgcaaacagcaaaagaagagattgagaaactgaaa
gaggaagtacatgctaacaaagcacacatgctgcagtataagagcattgctgaggtgaat
gaagatgcattgaaacaaatagaaagtgcacacgaggactacaagatagaggttgacaat
acaaagaaatctctagaggctgaactgaattcacttagagagaagatttcagagcttgaa
aaggaagctagtttgaaatctgatgaggttgtatctgcaactgctggaaaagaagaggct
ctgacatctgctttggctgagataacacatcttaaagaagaaattttaaccaaaacttct
caaatctcagaaatggaagttcagatatctggtttaaaagaacacctggacaaagagcat
cagaaatggcgtgcagctcaaacgaattacgaaagacaggttgttctccagtcagagact
attcaggagttgactaaaacatctgaaacactagccttgctgcaggaggaagcatctaaa
ttacgtaaattagctgatgctcagaaaattgaaaataatgaactaaaggctaggtgggaa
gaggagaaagcaagactagagaagtctaagtgtgatgctgaaaagaaatatgatgaaata
aatgagcagaataaaatcttacacagccaacttgaggcgttgcatattcaatgggctgag
aaggagcgcaatgctgctggtatttcacctggaagtaggggtgatacatttggtgatgct
ggccttcaaaacgttgtgaactatctccgccgttcaaaagaaattgcagaaacagaagtt
tcattattaaaacaggaaaagctgcgattacagtcacagcttgagagtgctttgaagtca
gcagaatctgctcatgcatctctagaagctcagcgtgtaaaatcaagatcatttatgttt
actgaagaagaaatcaaatccttacaacttcaggtcagggaaatgaacttgcttcgtgag
agtaatatgcagctcagggaagaaaataagcacaattttgaggaatgtcagaaattgcgt
gaactagcagaacaggcaagaactgccagagataatctagagaatcttgtaagggaaaga
gaaagtgaactggaaggccagaaaaaagagattgaaacactaaaaacggaaaaggaacat
ctcaattacaaggtttcagagttgcttgaaaggtgtaaaaatgttgatgcggaggattat
gatcgagtgaagaaacttgtacaagatttgcagggtaaactaagagacagggatgctcag
attgaggaaactagtaaaattctttcagaaaaacaggaatctttttcacgtttagagcaa
gacctttcaaactgcagattggaacttgtggaaaaagagaagagaattaatgaaattcca
aaaattgaggctaaccataaacaggatgtggataagaataggaaactgctggcccatttt
aagagaaggattgaggcattaaatacggaaaaggaagagctggtgaaagagaatcagcaa
ctttctggacagttaaataaggaaaaggaagagctagggaaagagaatcagcagctttct
agacagttagatgaaattaaacaacaagggaaaagatcaacaggtgatacagctggtgaa
caagcgatgaatcaagaaaaggacaccagaatacagatgctggaaagaactctggagaga
gtgagagctgacttaaacaaggagaaggaagacaaaactgcggagagaaataggcgactg
aaaaatgaaaaggccatagcggactcttacaaaaatattgacctggagagaaaacagttt
gttaatgacctcgagaggcataaggaggcgctgaagcgattgtctgatgaagttgaaaag
cttaagactcttgttggtaatcttcctgagggaaccaatgctgctcaacttctttcgaga
tccaatgttgatgacttctctgctccttatatggctgctgttgaaaattttgaaaaggaa
gctcatgcagtatgtgtcactcttggtgatccatcaacaattacagatagctcagcagct
gctacaggttctctggtccacactcaacctccaagcatattaccctcaacggcccctgtg
acaagcagtttaccacctaaggccactggagaaagtgagaaaaggcttgcactgacgaaa
tctagtaatgaaactcgtaaaactggtaggagactggtcaggccacgactagtaaagcca
gatgaaccacaaggggacactgaaatgtctgatgctgaaggacttgggggcaacaaacct
ggaccttctagtgacgcagaaacccaaagcaattttggtacatcatctcaaccagtggct
cggaaacgtgttgctcccacctcaacatctgagttgcgtgaagaatcttcggcacctggt
gagaagagctctgatgtagcagcacctgcgttaaagaagcccaaaggatctgagtttcca
gaagacagcggcgaagaacaacctgctacaaccccagaattcacttgcagtcatccagtt
gctgaagaatcatttgaaagtggtgagttgccacaaggccaaaatgaggaagtaggtgag
gctcaaaatgatgatgagaatgctgtggggaaggacgaagaatccgaagatccaccaaac
atggatggttctggtcaagaggaattacaagatgacaagactggagtttcagaagagaat
ctggatcaaccaacagaaacacaaatggtgtctgatgagatgcagagggatcatactgag
atagacaaccagcaatcaacattgcctctcagtagtgagacagaagagggagagatgttg
ccagaagccggagatcctgagggtggttttgatggatctaacatggaaaaccaagaatct
cgggaggcaactcctgaaccttccccagctagggttgatgatgatgatgctttagaggct
ggtgagattaattcgcctgagatttcaaccgatgataagaatgatgaaggtgacttggct
gaggatgctgctgatggatctgataaattagctgatgttaacaaagcaacatcagttgag
agtgatcaggtggttgagcctgcacctgtcgcgagcgagagtaatttgcagagtagcgtt
gcagaaagtagttcctcaaaattacctgtttcaaagcaaggggcgacgaggtctccctct
aaaacagaagacgtaaagccaacatcacccgtaaagccaacatcaccaattagtgatatg
tcaactacaactaccattaatttacaagagcgagcccgagagagagctcaattgagacaa
gctggacaagctggggtgttttccaccacagcaagaggtcgcggcagaattccccgtggt
cgggttgttcgaggtcgtggtcgcagaccaccatctagtgatgcatga
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integrated database retrieval system