Medicago truncatula (barrel medic): 11419223
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Entry
11419223 CDS
T01716
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit C
KO
K03252
translation initiation factor 3 subunit C
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
mtr03012
]
11419223
Translation factors [BR:
mtr03012
]
Eukaryotic type
Initiation factors
eIF-3
11419223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF-3c_N
PCI
DUF6291
DUF4363
Motif
Other DBs
NCBI-GeneID:
11419223
NCBI-ProteinID:
XP_003589347
UniProt:
Q9XHM1
G7I5V8
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Position
1:7457678..7463346
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AA seq
935 aa
AA seq
DB search
MTSRFFYQGGDQSDTDDEPTDIDDEPSDTEPAPTDPNGKSKYLAGGNADDSDDDDGQKRV
VKSAKDKRFDEMASTVDQIKNAIKINDWVSLQESFDKINKQLEKVMRVIESQKIPNLYIK
ALVMLEDFLAQASANKDAKKKMSPSNAKAFNSMKQKLKKNNKQYEDLIIKCRESPESEGE
KDEDDEDSDEYESDDEMIEPDQLRKPEPVSDSETSELGNDRPGDDGDAPWDQKLSKKDRL
LEKMFMKKPSEITWDTVNKKFKEILEARGRKGTGRFEQVEQLTFLTKVAKTPAQKLQILF
SVVSAQFDVNPGLSGHMPISVWKKCVQNMLVILDILVQHPNIKVDDSVELDENETKKGDD
YNGPINVWGNLVAFLEKIDAEFFKSLQCIDPHTREYVERLRDEPQFVVLAQNVQEYLESI
GDFKASSKVALKRVELIYYKPHEVYEATRKLAEMTVEGDNGEMSEEPKGFEDTRIPAPFV
VTLELVARKPTFPENSRTLMDVLVSLIYKYGDERTKARAMLCDIYHHALLDEFAVARDLL
LMSHLQENVHHMDISTQILFNRAMSQLGLCAFRAGLVSEAHGCLSELYSGGRVKELLAQG
VSQSRYHEKTPEQERLERRRQMPYHMHINLELLESVHLTSAMLLEVPNMAANVHDAKRKI
ISKNFRRLLEVSEKQTFTGPPETVRDHVMAATRVLINGDFQKAFDIIASLDVWKFVKNRD
AVLEMLKDKIKEEALRTYLFTFSSSYDSLSVVQLTNFFDLSLPRVHSIVSRMMVNEELHA
SWDQPTGCIIFRNVEHSRVQALAFQLTEKLSILAESNERATEARLGGGGLDLPPRRRDGQ
DYAAAAAGGGSGTSSGGRWQDLSYSQTRQGSGRTGYGGGRALSFSQAGGSGGYSRGRGTG
GGGYQNSGRTQGGSALRGPHGDTSTRMVSLRGVRA
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgacttccagattcttttaccagggtggtgatcaaagtgataccgacgatgaacccact
gatattgatgacgaacccagtgatactgaacccgctccaacagatccaaacggtaaaagc
aaatacttggctggtggtaatgctgatgacagcgacgatgatgatggccaaaagcgtgtt
gttaagtctgctaaagataagcgttttgatgagatggcttccactgttgatcagatcaag
aatgctatcaagatcaatgactgggtcagcttgcaagagagctttgacaagatcaacaaa
cagctcgagaaagttatgcgtgttatcgagtcccaaaagatccccaatctctacatcaag
gcgctcgtaatgcttgaagatttcctcgctcaggcttctgctaataaggatgccaaaaag
aagatgagtcccagcaatgccaaagccttcaactcaatgaagcaaaaattaaagaagaac
aataagcaatacgaggacttgattatcaaatgcagggagagtcctgagagtgagggcgaa
aaggatgaagacgatgaagactctgacgaatatgagtccgatgatgagatgattgaacct
gatcagctcaggaagccggagcctgtatcggattctgaaacttctgagcttggtaatgac
aggcctggtgatgatggcgatgctccttgggatcaaaaacttagcaagaaagacaggctt
ttggaaaaaatgttcatgaaaaagcctagtgagatcacatgggacacggttaacaagaag
ttcaaagagattctggaagccaggggcaggaagggaactggaaggtttgaacaggttgag
cagcttaccttcctaacaaaagttgctaaaacacctgctcagaagctgcaaattcttttc
agtgtggtttctgctcagtttgatgttaatccaggcctcagtggccatatgcccataagt
gtgtggaaaaagtgtgtgcagaacatgctggtcattctcgacattctcgtgcagcaccca
aacataaaggttgatgattctgtggagctagacgagaatgaaactaagaaaggggatgac
tataacggacccattaatgtctggggcaacttagttgctttcttagaaaaaatagatgcc
gagtttttcaagagcttgcagtgcattgatccccacacacgggaatatgttgagagactc
agggatgagcctcagtttgttgttcttgcacagaatgtccaggaatatcttgaaagcatt
ggagatttcaaagcttcttctaaggtagccttgaagagggttgaactcatttactacaaa
ccacatgaggtttacgaagcaacgagaaaattggctgagatgacagtagagggagataat
ggagagatgagtgaggagccaaaaggttttgaggatacaagaattcctgctccgtttgtt
gttaccctggaacttgtggcgcggaaacccaccttcccggaaaatagcaggaccttaatg
gatgtgttagtatcactgatatataaatacggagatgagcgcactaaagcacgcgcaatg
ctttgtgatatatatcaccatgctcttcttgatgagtttgcagtagcccgtgatctgttg
cttatgagtcatttgcaagaaaatgttcaccacatggacatttcgacacaaatacttttt
aacagggctatgtcacagttaggtctttgtgcttttcgggctgggctggtttctgaagcg
catggctgtttgtctgaactttattctggtggacgggtgaaggaattgcttgcgcaagga
gtttcacagagccgttatcatgaaaagaccccagaacaggaaaggttggaaagaagacgg
cagatgccatatcatatgcatataaatcttgagctcctggaatcagtgcatcttacatct
gctatgctgctggaagttcccaacatggcagccaatgttcatgatgcaaagcgtaagatc
atcagtaagaatttccgacgcttgcttgaggtcagcgagaaacaaacattcaccggtcct
cctgaaactgtcagggatcatgttatggctgccacaagggttcttattaatggagatttc
cagaaggcctttgacattattgcatctcttgacgtctggaaatttgtgaaaaatcgagac
gccgtgctagaaatgcttaaggacaaaatcaaggaagaggcacttaggacatacctattt
accttctcttcatcatatgattctttgagcgtggttcagctcacaaattttttcgatctc
tctcttcctcgtgttcatagtattgtcagtaggatgatggtcaatgaggagcttcatgca
agctgggatcaaccaactgggtgcattattttccgaaatgttgaacactcaagggtgcag
gctttggcattccagttgactgagaaattatctatccttgcagagagtaatgaaagagct
acagaagcaaggttaggcggcggtgggttggatctgcctccaaggcggagagatgggcag
gattatgccgctgcagctgctggcggtggtagtggaacgtcttcaggtggcaggtggcaa
gacttgtcctattctcaaacaaggcaaggcagtggacgtacgggatacggtggaggaaga
gcattatcgttcagtcaagctggtgggagtggtggctattctagaggacggggaacgggt
ggaggcggctatcagaattcagggaggactcaagggggttcagcattgaggggaccccac
ggagatacttctacccgcatggttagccttaggggagttcgtgcttga
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