Medicago truncatula (barrel medic): 11420884
Help
Entry
11420884 CDS
T01716
Name
(RefSeq) protein ALTERED SEED GERMINATION 2
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
11420884
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
11420884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
TPR_2
Motif
Other DBs
NCBI-GeneID:
11420884
NCBI-ProteinID:
XP_003602948
UniProt:
G7J574
LinkDB
All DBs
Position
3:complement(49776286..49788612)
Genome browser
AA seq
759 aa
AA seq
DB search
MDSSPFLDGNIHRILDSRYLHSRPDVNQSLQTHSSLIRRLSQEKELEGHLGCVNAIAWNS
KGSLLVSGSDDTRINVWSYAGQKLVHSIDTGHTANIFCTKFIPETSDELVASGAGDAEVR
LFNRSRVSGNGLNDNPITPSALYQCHTRRVKKLAVENGNPNVVWSASEDGTLRQHDFREG
TSCPPAGSPRQECHNVLLDLRNGAKRSLGDPPKQVLALKSFDISSTRPHLLLVGGSDAFA
RLYDRRMLPPLSSCGKRMPPPPCVNYFCPMHLSDRGHPSLHLTHVTFSPDGSEVLLSYSG
EHVYLMNVNHAGVNEVQYSSGDVSKLMTYSPSVNGLELQPFVSNVFTNGFHTKKNITAKL
DKCRKLIKYGKKSLDEGAPYYGIEACNEVLIGYNHIIGPALKQECLCTRAALLLKRKWKN
DAHMAIRDCHAARKFDKSAYKPLYYMSEALSQLGKHKEALDFAVASHSLAPSKSEVAERV
ENAKKDIVLAETEKNSKTNNGRGGRMLSLSDILYRSEANSDTSQDGQRSDRDDSDYEEEM
ELDFETSVSGDEEHDSDSNILHRSLNLRIHRRGDSRENVEASGSDESPSSSSSSQNGRAS
YQPEAAIDMKQRFIGHCNVGTDIKQANFLGQKGEYVASGSDDGRWFIWEKRTGRLMKLLS
GDESVVNCVQCHPFDFVVATSGIDNTIKIWTPSAPVASSVAGGSAGPETGDVLGAMENNQ
QKLSRNRDSMLPFELLEPFRMHEFPEGSLRLRPFECAQT
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggattcctctccttttctcgacggaaacatacacagaattctcgattctcgatacctt
cactctcgccctgatgttaatcagagtttgcagacacactcctctttgattcgaagactt
tctcaagaaaaagagttagagggacatcttggttgtgtcaatgctattgcttggaattca
aaaggttcattattggtatccggatcagatgatacacggatcaatgtttggagctatgct
ggtcagaaactagtgcattcaattgacaccggacatactgcaaatatattctgtactaag
ttcataccagaaacatctgatgagcttgtagcctctggggcgggagatgctgaagttcgg
ttattcaataggtctcgcgtaagtggcaatggacttaatgataatcccattactccatca
gcactttaccaatgccacactcgtagggtcaagaaattggctgttgaaaatggaaatccc
aatgtggtatggagtgccagtgaagatggaaccttaagacaacatgattttcgggaaggc
acctcttgtcctcctgcaggatctccacgccaagagtgtcacaatgttctacttgactta
cggaatggagctaaaagatcccttggtgatcctcctaaacaagtccttgctttaaaatct
ttcgatattagttcaactagacctcatttgctccttgttggtgggagtgatgcctttgca
cgtctgtatgatagaaggatgctaccacctctaagctcctgtggaaaaagaatgcctcca
cctccttgtgttaattatttttgtccaatgcacctttctgatcgtggacatccaagtttg
cacttaactcatgttacatttagtcctgatggatctgaggttctcctgagctatagcgga
gagcatgtttacttgatgaatgtaaatcatgctggtgtgaatgaggtgcaatatagttca
ggagatgtttcaaagctgatgacttactctccaagcgttaatgggttagaattacagcct
tttgtttccaatgtcttcacaaatggttttcacactaaaaagaacatcactgccaagctt
gacaagtgtaggaaactaataaaatatggtaagaagtcattggacgagggggcaccctat
tatggaattgaggcatgtaatgaagttttgattggctacaatcatattattggacctgca
ctaaaacaggaatgcttgtgtactcgtgctgcactattgcttaagaggaagtggaaaaac
gatgctcatatggctataagagactgccatgctgctaggaaatttgataaatccgcatat
aaaccactttactacatgtcagaagcattgtctcagttggggaaacacaaagaagctttg
gattttgctgttgcttcccactcgctggccccatccaaatctgaagttgctgaaagagtg
gagaatgcgaagaaggatatagttttagctgaaactgagaaaaatagtaagacaaataat
ggaagaggtggaagaatgttatcattaagtgacattctctaccggtcagaggctaatagt
gatacttcacaagatggtcagagatctgacagggatgattctgattatgaggaggaaatg
gagttggactttgaaacatcagtatctggtgacgaggaacatgattctgattcaaatatt
cttcaccgcagtttgaatcttagaattcatcgaagaggtgactcgagagaaaatgttgaa
gcaagtggctcggacgaatcaccctcatcatcatcatcatcacagaatggtagagcttca
taccagcccgaagcagctattgatatgaagcagaggtttattgggcactgcaatgtgggg
actgatataaaacaggctaattttcttggtcaaaaaggtgaatatgttgccagcggtagt
gatgatggcagatggtttatttgggaaaagcggactggaagactcatgaaattgctgagt
ggcgatgaatctgttgtaaattgcgtacaatgtcatccatttgattttgttgtggcaaca
agtgggattgataacacaataaagatatggactccaagtgctcctgttgcatcttctgta
gctggtggttctgcaggaccagaaactggtgatgtgttgggtgctatggagaacaatcaa
caaaagttatcccgtaatagggattcaatgctgccctttgagctcttagaaccatttaga
atgcatgagtttcctgaaggatcactacgcttgcgaccttttgaatgtgcccaaacctaa
DBGET
integrated database retrieval system
