KEGG   Medicago truncatula (barrel medic): 11421562
Entry
11421562          CDS       T01716                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 9
  KO
K03133  transcription initiation factor TFIID subunit 9B
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    11421562
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mtr03021]
    11421562
   03036 Chromosome and associated proteins [BR:mtr03036]
    11421562
Transcription machinery [BR:mtr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     11421562
   Coactivators
    SAGA/TFTC/STAGA complex
     11421562
Chromosome and associated proteins [BR:mtr03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     11421562
    STAGA complex
     11421562
    TFTC complex
     11421562
    SAGA complex
     11421562
    SLIK complex
     11421562
SSDB
Motif
Pfam: TFIID-31kDa CENP-S Bromo_TP CENP-T_C LonB_AAA-LID Histone TIP49_C
Other DBs
NCBI-GeneID: 11421562
NCBI-ProteinID: XP_003598543
UniProt: G7IVW0
LinkDB
Position
3:complement(4457166..4460830)
AA seq 179 aa
MADNEEDSNMPRDAKIVQSLLKSMGVEEYEPRVINKFLELWYRYVVDVLTDAQVYSEHAG
KPAIDVDDVKLAIQSQVNFSFSQPPPREVLLELAQNRNKIPLPKSIAGPGFPLSPDQDTL
IAPNYQFAIPNKRSVEPMEETEDEEVPNADPNPSQEEKTDAQQNPHQRVSFPLPKRQKD
NT seq 540 nt   +upstreamnt  +downstreamnt
atggctgataacgaggaagattcgaatatgccaagggatgcaaagattgtgcagtctttg
ttgaaatcaatgggtgtggaagaatatgaacctcgtgttataaacaagttccttgagcta
tggtatcgctatgtggttgatgtgttaacagatgcccaggtgtattcagagcatgctggc
aagcctgcaattgatgttgatgatgttaagctggccattcaatcccaggtcaacttcagc
ttctctcaaccaccccctcgtgaggtgcttctagagctagcacaaaatcgcaacaagata
ccattgccgaagtctatagcagggcctgggtttccactttcacccgatcaagacacattg
attgctcccaactaccagtttgcaattccaaacaaaaggtctgtcgaacctatggaagaa
actgaggatgaagaagttcccaatgccgatcccaacccatctcaagaagagaagacagat
gcgcaacaaaatccccatcaaagagtgtcatttcccctgcctaaacgccaaaaggattga

DBGET integrated database retrieval system