Medicago truncatula (barrel medic): 11427699
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Entry
11427699 CDS
T01716
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1A
KO
K15559
regulator of Ty1 transposition protein 103
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtr03021
]
11427699
Transcription machinery [BR:
mtr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
11427699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
Motif
Other DBs
NCBI-GeneID:
11427699
NCBI-ProteinID:
XP_003618944
UniProt:
G7KPK5
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All DBs
Position
6:9704119..9715708
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AA seq
542 aa
AA seq
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MGNDAYDGQVLAEKLRKLNNSQQSIESVSRLCVSHRKRAKDIVETWNKSFGSSQKEQRVP
FLNLANDILQNSRRKGSEFVNEFWKVLPSALKRVYASDEPGKKSVIRLIDIWEERKVFGS
RSQGLKEEITGKSNGKNSNPIKIAKRDAHSLRLKLAIGCLPEKIITALHFVNEEHPNEEA
SLNKCSAALSQLGKLVEDVENTLSQGNQPGSTLVNDLQQQEKELTQNIVQLENTEAIRAT
LLSQLKEALQEQESRQELVHSRLQAARDHIEQVASIRKRFSQAPETTRVPEQTTPSVQLN
STPPPPSFTQPTMSFAPLQTTEDDKKAAAAAVAARLTASTSSALMLTSILSSLVAEEAAS
KNGSLNSAEFNSAPPGFHPEKRPKLEQQMPVSDVNSSDTGSSSFFATFQQSSSANMPLTP
PSMQSISQTNQLQGAFASAPPPPPHSHMNPQANQYVQSAGMMVGGVPYGYGSNNLQPPPP
PPLPPHVAMGLTRPSNQPSQSPQSQSQQAQQQQQSSAGGFYRPPGFYGQIHPPTPPAPTP
RQ
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacgatgcgtatgatggacaagttttagcagagaagttgcggaaactcaacaac
tcgcaacaaagcattgaatctgtatcccgattgtgtgtttctcaccgtaagagagcaaaa
gatatagttgaaacatggaataaatcgttcggttcttcccagaaagagcagcgtgtccct
tttctgaacttggctaatgacatcttgcaaaatagtaggcggaaaggcagtgagttcgtt
aatgaattctggaaagttcttccatcagctctcaagcgtgtttatgcaagtgatgagccg
ggaaagaaatcagtgatcagacttattgacatatgggaggaaagaaaggtttttggttcg
cggtctcaaggtctcaaggaagaaataacgggcaagagcaatggaaagaattcaaatcct
atcaagatagctaagagggacgcccactcattgagattaaaactagctattggatgtttg
ccagagaaaataataacagcattgcattttgtaaatgaagaacatcctaatgaggaagct
tccttgaacaagtgtagtgctgctttatctcaattgggtaaacttgtagaagatgttgaa
aatacactgtctcaaggaaatcaaccaggatccactttggttaatgacttgcaacagcag
gaaaaggagcttacacaaaatatagtgcaacttgaaaatactgaggctatcagggctact
ttgctttcccagcttaaagaagcattgcaggaacaggaatcaaggcaagaacttgttcac
tctcgattgcaagcggcacgagaccacattgagcaagtagccagtatcaggaagaggttt
agccaagcaccagaaaccacaagggtgccggaacaaactactccatctgttcaactgaac
agcacccctcctccgccttcttttactcaacctaccatgtcatttgctcctcttcaaact
actgaagacgataagaaggcagcagcagctgctgttgctgctaggcttactgcctctaca
tcctcagctctcatgctcacatctattctttcttcacttgttgctgaagaagcagcctcc
aagaatggtagtttgaactctgctgagtttaattcagcaccacctggtttccatcctgag
aaaagacccaaacttgaacagcaaatgcctgtttctgatgtcaacagttctgacaccggg
agctcttcttttttcgccacttttcaacaatcttcttcggcaaatatgccactaacacca
ccaagcatgcaatccatatcacaaaccaatcaattacagggtgcatttgcttcagcaccc
cctccccctcctcattcacatatgaatccacaagcaaatcagtacgttcaatctgccgga
atgatggttgggggagttccttatggatatggatcaaacaacctacaacctccacctcca
cctcctttgcctccacatgtggcaatggggttaactaggcccagtaatcagccatcacaa
tcacctcaatcacagtctcagcaagcgcagcagcaacaacaatcttcagctggaggattt
tacaggccacctggattttatgggcaaatccatccaccaacaccaccggcaccgacacct
agacagtga
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