Medicago truncatula (barrel medic): 11428517
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Entry
11428517 CDS
T01716
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit C-like
KO
K03252
translation initiation factor 3 subunit C
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
mtr03012
]
11428517
Translation factors [BR:
mtr03012
]
Eukaryotic type
Initiation factors
eIF-3
11428517
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF-3c_N
PCI
DUF6291
Motif
Other DBs
NCBI-GeneID:
11428517
NCBI-ProteinID:
XP_039686116
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Position
2:complement(241590..247104)
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AA seq
935 aa
AA seq
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MTSRFFYQGGDHSDTDDEPTDIDDEPSDTEPAPTDPNGKSKYYVDGNADDSDDDDGQKRV
VKSAKDKRFDEMASTVDQIKNAIKINDWVSLQESFDKINKQLEKVMRVIESQKIPNLYIK
ALVMLEDFLAQASANKDAKKKMSPSNAKAFNSMKQKLKKNNKQYEDLIIKCRESPESEGE
KDDDDDDSDDYDSDDEIIEPDQLRKPEPISDSETSELGNDRPGDDGDAPWDQKLSKKDRL
LEKMFMKKPSEITWDTVNKKFKEILEARGRKGTGRFEQVEQLTFLTKVAKTPAQKLQILF
SVVSAQFDVNPGLSGHMPINVWKKCVQNMLVILDILVQHPNIKVDDSVELDENETKKGDD
YDGPIHVWGNLVAFLEKIDAEFFKSLQCIDPHTREYVERLRDEPQFVVLAQNVQEYLESI
GDFKASSKVALKRVELIYYKPHEVYEATRKLAEMTVEGDNGEMSEESKGFEDTRIPAPFV
VTPELVARKPTFPENSRTLMDVLVSLIYKYGDERTKARAMLCDIYHHALLDEFTVARDLL
LMSHLQENVHHMDISTQILFNRAMSQLGLCAFRVGLVSEAHGCLSELYSGGRVKELLAQG
VSQSRYHEKTPEQERLERRRQMPYHMHINLELLESVHLTSAMLLEVPNMAANVHDAKRKI
ISKNFRRLLEVSEKQTFTGPPETVRDHVMAATRVLINGDFQKAFDIIASLEVWKFVKNRD
TVLEMLKDKIKEEALRTYLFTFSSSYDSLSVDQLTNFFDLSLPRVHSIVSRMMINEELHA
SWDQPTGCIIFRNVEHSRVQALAFQLTEKLSILAESNERATEARLGGGGLDLPPRRRDGQ
DYAAAAAGGGSGTSSGGRWQDLSYSQTRQGSGRTGYGGGRALSFSQAGGSGGYSRGRGTG
GGGYQNSGRTQGGSTLRGPHGDTSTRMVSLRGVRA
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgacttccagattcttttaccagggtggtgatcacagtgataccgacgatgaacccact
gatattgatgatgaacccagtgatactgaacccgctccaacagatccaaacggtaaaagc
aaatactacgttgatggtaatgctgatgacagtgacgacgatgatggccaaaagcgtgtt
gttaaatctgctaaagataagcgttttgatgagatggcttccaccgtcgatcagatcaag
aatgccatcaagatcaatgactgggtcagcttgcaagagagctttgacaagatcaacaaa
cagctcgagaaagttatgcgtgttatcgagtcccaaaagatccccaatctctacatcaag
gctcttgtaatgcttgaagatttcctcgctcaggcttctgctaataaggatgccaaaaag
aagatgagtcccagcaatgccaaagctttcaactcaatgaagcagaaactgaagaagaac
aataagcaatacgaggacttgattatcaaatgcagggagagtcctgagagcgagggggaa
aaggatgacgatgatgacgactctgacgactacgactccgatgatgagattattgaacct
gatcagctcaggaagccggagcccatatccgattctgaaacttctgagcttggtaatgat
aggcctggtgatgatggcgatgctccttgggatcaaaagcttagcaagaaagacaggctt
ttggagaaaatgttcatgaaaaaacctagtgagatcacatgggacactgttaacaagaag
ttcaaagagattctggaagccaggggcaggaagggaactggaaggtttgaacaggttgag
cagcttactttcctaacaaaagttgctaaaacacctgctcagaagctgcaaattcttttc
agtgtggtttctgctcagtttgatgttaatccaggactcagtgggcatatgcccataaat
gtgtggaaaaagtgtgtgcagaacatgctggtcatcctcgacattctcgtgcagcaccca
aacataaaggttgatgattctgtggagctagacgagaatgaaactaagaaaggggatgac
tatgacggacccattcatgtctggggtaacttagttgctttcttagaaaaaatagatgcc
gagtttttcaagagcttgcagtgcattgatccccacacacgtgaatatgttgagagactc
agggatgagcctcagtttgttgttcttgcacagaatgtccaggaatatcttgaaagcatt
ggagatttcaaagcttcttctaaggtggccttgaagagggttgaactcatttactacaag
ccacatgaggtttacgaagcaacgagaaaattggctgagatgacagttgagggagataat
ggagagatgagtgaggagtcaaaaggttttgaggatacaagaattcctgctccatttgtt
gttaccccggaacttgtggcgcggaaaccaaccttcccggaaaatagcaggaccttaatg
gatgtgttagtatcactgatatacaaatacggagatgagcgcactaaagcacgcgcaatg
ctttgtgatatatatcaccatgctcttcttgacgagttcacagtagcccgtgatttgttg
cttatgagtcatttgcaagaaaatgttcaccacatggacatttcgacacaaatacttttt
aacagggctatgtcacagttaggtctatgtgcttttcgggttgggctggtttctgaagcg
catggctgtttgtcggaactttattctggtgggcgtgtgaaagaattgcttgcgcaagga
gtttcacagagccgttatcatgaaaagactccagaacaggaaaggttggaaagaagacgg
cagatgccatatcatatgcatataaatcttgagctcctggaatcagtgcatcttacatct
gctatgctgctggaagttccaaacatggcagccaatgttcatgatgctaagcgtaagatc
atcagtaagaatttccgccgcttgcttgaggtcagtgagaaacaaacattcaccggtcct
cctgaaactgtcagggatcatgttatggctgccacaagggttcttattaatggagatttc
cagaaggcctttgacattattgcatctcttgaggtttggaaatttgtgaaaaatcgtgac
accgtgctagaaatgctgaaggacaaaatcaaggaggaggcgcttaggacatacctattt
actttctcttcatcatatgattctttgagtgtggatcagctcacaaattttttcgatctc
tctcttcctcgtgttcatagtattgtcagtaggatgatgatcaatgaggagcttcatgca
agctgggatcagccaactgggtgcattattttcagaaatgttgaacactcaagggtgcag
gctttggcattccagttgactgagaaattatctatccttgcagagagtaatgaaagagct
acagaagcaaggttaggcggtggtgggttggatctgcctccaaggcggagagatgggcag
gattatgccgctgcagctgctggcggtggcagtggaacgtcttcaggtggcaggtggcaa
gacttgtcctattctcaaacaaggcaaggcagtggacgcacgggatacggtggaggaagg
gcattatcgttcagtcaagctggtgggagtggcggctattctagaggacggggaacgggt
ggaggcggctatcagaattcagggaggactcaagggggttcaacattgaggggaccccac
ggagatacttcaacccgcatggttagccttaggggagttcgtgcttga
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