Medicago truncatula (barrel medic): 11428939
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Entry
11428939 CDS
T01716
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 27
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mtr01002
]
11428939
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mtr04131
]
11428939
04121 Ubiquitin system [BR:
mtr04121
]
11428939
Enzymes [BR:
mtr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
11428939
Peptidases and inhibitors [BR:
mtr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
11428939
Membrane trafficking [BR:
mtr04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
11428939
Ubiquitin system [BR:
mtr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
11428939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
11428939
NCBI-ProteinID:
XP_003630151
UniProt:
G7LC68
LinkDB
All DBs
Position
8:complement(42757021..42765159)
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AA seq
573 aa
AA seq
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MKKTLSFDTNWTLSSSTRIRVAAVTAIAAIAASVLALKDAKSSKPIRSRFSLASLLPDYN
QDNHSDKPIFVPGLRNLGNNCFLNVVLQALASCVCFQSFLDDVIAEYGTDEQLVENMPLV
FSLASLLQELSSVSAQKVVLSPRQLMRAMSSYIPNFDLTSQQDAAEAFVHLLGTLKEEVG
GCYAPKISSLADTFASNNRILTPIQTEWQSEPERWRRLFLGPFDGILNSGLTCQSCLSQI
SNKFENFDCLPLSPVLSNRYAIRVGCTLEECLKQFIVAEHIENYNCSHCWHNAAIKYLSL
MEGDKVELGNLGRCSDQEFCDCQKTYNLENLPWSNRFSHALKQLSIARCPRILCIQLKRV
HMNDFGESFKLQGHISFPLILDVSSFMTTRLGVKIQEEDVVKIQEEDVQSRSNSLPNHSN
MHSGIIRMIKSGVLYGGAREQIDADARIEIVSSSTSRQAILINFPCSGSSESIQSNTQSQ
SIDTVDVSCTSDSQDTCLYQLVSVVEHFGRAGGGHYTVYRCVRPESSDVSGDCINQNSMR
WFGVSDSHVDAVSVEEVLSAEASLLFYERIPNN
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagacgctatcctttgacacgaattggacactatcttcttctaccaggattcgc
gtagcagcagttactgccattgcggccattgctgcttccgtattagctctaaaagatgcc
aaatcttctaaaccaattaggtcccgtttttctttagcttctttattaccagattataat
caagataaccactccgataaacccatttttgttcccggcttgcgaaacctcggcaacaat
tgtttcctcaacgtcgttttgcaggctctggctagttgtgtttgctttcagagttttctt
gatgacgttattgctgaatatgggactgatgaacaacttgttgaaaacatgcctcttgtt
ttttctttggcttctttattacaagagctgagctcagttagtgctcaaaaggttgtattg
agtccgcggcagttgatgcgtgctatgtccagctacattccaaattttgatcttacgagc
cagcaggatgctgctgaagcgtttgttcacctattgggcacattgaaagaagaagttgga
ggttgttatgctccaaagataagttctttagcagacacttttgcttctaataatagaatt
cttactccaatacagacggagtggcagagtgagccagagagatggcggcgcctctttctt
ggaccctttgatgggattctgaacagcggcttaacttgtcaaagttgcttgtcccagatc
tcaaataaatttgaaaattttgattgtttgcctctttcacctgtgcttagtaatagatac
gctataagagttggttgtaccctggaggaatgcctgaagcagttcattgtagctgaacac
attgaaaactacaactgcagccactgttggcataatgctgcaatcaagtatctttccttg
atggaaggagacaaggtagaacttggaaaccttgggagatgttctgaccaagagttctgt
gattgccaaaaaacttataatcttgaaaatctaccgtggtcaaataggttttcacatgct
ttgaagcagctaagtattgctcgctgtccaaggattttatgcatccagctgaaaagagtt
cacatgaatgattttggagagtcattcaaattacagggccatatatcttttccattgatt
ttggatgtgtcctcattcatgacaactagactaggagtgaagatacaggaagaagatgta
gtgaagatacaggaagaagatgtacaaagtagatctaactctttgccaaaccatagcaat
atgcattctgggataataaggatgattaaatctggtgtcctttatggaggagctagagag
cagatcgatgcagatgctcgtattgaaatagttagctcgtccactagtagacaggcaatt
cttattaactttccttgttctggttcttcagaaagcattcagtcaaacacacagtcgcaa
tccattgacacggtggatgtttcttgtacttcagattctcaagatacatgtttgtatcaa
cttgtttctgttgtggaacactttggaagagctggaggaggacattacactgtctacaga
tgtgtgagaccagagtcctcagatgtctcgggtgattgcatcaatcaaaattcaatgcgc
tggtttggtgtttcagattctcacgtggatgctgtttcggtcgaagaagttctgtctgct
gaggccagcttgcttttctacgagagaattccaaataactga
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