Medicago truncatula (barrel medic): 11430819
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Entry
11430819 CDS
T01716
Name
(RefSeq) serine/arginine-rich splicing factor SR34A isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
11430819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mtr03041
]
11430819
Spliceosome [BR:
mtr03041
]
Common components
Common spliceosomal components
SR proteins
11430819
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Transformer
Motif
Other DBs
NCBI-GeneID:
11430819
NCBI-ProteinID:
XP_024635813
LinkDB
All DBs
Position
3:complement(45761597..45766798)
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AA seq
273 aa
AA seq
DB search
MSSRFSRTIYVGNLPADIRESEIEDLFYKYGRIMEIELKVPPRPPCYCFVEFDNARDAED
AIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGGGGGGGGRGGGGDSAGGGRFGVSRH
SEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKL
DDTEFRNPWARSYIRVRKYESSRSRSRSRSPSRSRSPKRARSRSLERSVSRSRSISRSRS
ASPIKPARPRSPSRSASPRSPPRSPRQVLSGSG
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtcgcttttctcgcacaatctatgttggcaacctgcccgctgatataagagaa
tcagaaattgaagatctgttctacaagtatggccgcataatggaaattgaattgaaggtt
cctcctcgccctccatgttattgttttgttgagtttgacaatgctcgagatgctgaagat
gcaattcggggtcgtgatggttacaactttgatggttgtcgattaagagtggagctcgcc
catggaggcagagggccatcatcaagtgaccgacgtgggtatggtggtggtggcggcggc
ggtggaagaggcggcggcggtgatagtgctggtgggggccgttttggtgtctctcgccat
tctgaatttcgagttattgttcgaggactcccatcttctgcatcctggcaggatttgaag
gatcatatgcgaaaagctggtgatgtttgctttgctgaagtttcccgtgacagtgaaggg
acttttggccttgttgattacactaattacgatgacatgaaatatgctattcggaaattg
gatgacactgagttcagaaatccttgggcgagatcatatattcgggttaggaagtatgag
agcagtcgttcaaggagccgcagcagaagccccagcaggagcagaagtccgaaaagggcc
agaagtaggtctttggagcgatctgtttctaggtcacggtctatttccagatccagatca
gcatcaccaatcaagcctgccaggccacgatcaccatcacgttcagcgtctccgcgatca
ccgccgcgatcaccacgccaggttctgtctggtagcggttga
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