Medicago truncatula (barrel medic): 11434873
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Entry
11434873 CDS
T01716
Name
(RefSeq) nuclear pore complex protein NUP133
KO
K14300
nuclear pore complex protein Nup133
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
11434873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11434873
03036 Chromosome and associated proteins [BR:
mtr03036
]
11434873
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
11434873
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
11434873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
TLV_coat
Motif
Other DBs
NCBI-GeneID:
11434873
NCBI-ProteinID:
XP_003617946
UniProt:
G7KEN0
LinkDB
All DBs
Position
5:43773811..43783616
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AA seq
1308 aa
AA seq
DB search
MFSTGPKKKKNNPRTPPTLSDSPVTPSPLRRTSFNDTAIPNRPPTGTPAPWTPRLSVLAR
VPQVNRNGKEDDNDPIKPVFVSEFPKVVCDEQATSLQRRVSFEDCGGYGGIDKSTSLAWI
ICGSKVFVWSYLSPASSMNCVVLEIPFNDVANYDTGSWLVSVVNCDSSSFGSNKAAKHVA
VVLCNRKTRAVIYWPDIYSQSSNAPVTSLASSDELEAVGEKTPFKRQTRQSKQETDLTEL
NAFNSVIASVVPGYSLACIALACSSSGELWQFECSPTGIRRRKVYEIISHFPLKGGDLGK
LVSNKGYPRSLTWRFPYHSSKESNRQFLVLTDCELQCFRVEFSSGMNISRLWSQEIVGTD
AELGIKKDLAGQKGIWPLDVQVDDHGKVITILVATFCKDRISSSSYMQYSLLTMQYKSGL
DVESTNERILEKKVPIEVIIPKARVEDEDFLFSMRLRIGGKPSGSTVIISGDGTATVSHY
HRNATRLYQFDLPYDAGKVLDASVLPSADDYEEGAWVVLTEKAGIWVIPEKAVILGGVEP
PERSLSRKGSSNERSAQEETRNLTFTGNFAPRRASSEAWGSGDRQRAALSGITRRTAQDE
ESEALLNRFFNEFLSSGQVDGSLEKLETSGSFERDGETNVFVRMSKSIIDTLAKHWTTTR
GAEILSMAVVSTQLLEKQQKHQKFLHFLALSKCHDELCSRQRHALQIILEHGEKLSAMIQ
LRELQNLISQNRSTGVGSSNSNVDIQMSGALWDMIQLVGERARRNTVLLMDRDNAEVFYS
KVSDLENFFYCSDAELEYVIRPEHLLAIQIQRACELSNACVSIIRTCFDYKNENHLWYPP
PEGLTPWYCQPVVRKGIWSVGSVLLQFLNDTSGLDKTVKLELYNHLEALTEVLLEAYSGA
VTAKIERGEEHKGLLNEYWERRDALLESLYHQVKEFEATYKDSIVVAEEFNEEATMKITS
HLLSIAKRHGCYKVMWTICCDVNDSELLRNVMHESSGSTGGFSDYVFKKLHESKQFSELL
RLGEEFPEELSFFVKEHPDLLWLHDLFLHHFSSASETLHALALTQNKQSTAVIEENEQVD
MKLKLKDRKNLLYLSKIAAFAAGKDAGTQVKVDRIEADLKILKLQEEVMKHFTSLEDKEP
VDDQLLHPEDLIKLCLEGEEPEFSLWTFDVFAWTSSSFRKSHRKLLEDCWKKAASQDDWS
KFHDSYSVEGWSDEETVQNLKNTVLFQASSRCYAPQSQTFEEGFDQVLPLRQENMETSTL
GDMSSSVETILMQHKDFPVAGKLMLMAVMLGSEHSGDNRIEEGPSPME
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaactggaccgaagaagaagaagaacaatcctcgcactcctcccacactatcc
gattctccggtaactccttcaccgctccgacgaacctcattcaacgacaccgccatccct
aaccgtcctcccaccggcactcccgctccttggacacctcgcttatctgttctcgccagg
gttccacaagtgaatagaaatggaaaagaggatgataatgatccgattaaaccggttttt
gtttccgagtttccgaaagttgtctgtgatgaacaagctacttcgttgcagagacgagtt
tcatttgaagactgtggcgggtatggtgggattgacaagagtacatctcttgcttggatc
atttgtggaagcaaggtctttgtttggagttacttatcgcctgcgtcttctatgaattgt
gttgttctcgagattcctttcaatgatgttgccaattacgatactggtagttggttggtt
tctgtggttaattgtgatagctcctcttttggatcaaataaggctgcgaaacatgttgcg
gttgttttgtgcaatagaaagactcgggcagttatatactggccggacatctattctcaa
tcgagcaatgctcctgtcactagtcttgcgtcttctgatgagttggaggctgttggtgag
aaaacacccttcaagaggcagacacggcaaagtaagcaggaaactgatttgactgaattg
aacgcatttaattctgtgattgcttctgtagttcccggttatagcttggcatgtattgcc
cttgcgtgtagctcaagtggtgagctttggcaatttgaatgcagtcctactggcattcgt
cgaaggaaagtatacgaaattatttctcatttccctctcaaaggcggtgatttgggtaaa
ctcgtgagtaacaaagggtacccaaggtctttgacatggcgttttccatatcattctagt
aaggaatcaaatcgacagtttttggtgttgacagactgtgagttacagtgtttcagagtc
gagtttagttctggtatgaatatttcaaggctttggtctcaggaaattgttggaacagat
gctgagctcggcattaagaaagatctggcaggtcaaaagggaatctggcctcttgatgtg
caggtagatgatcatggtaaagtgatcaccattctcgttgcaaccttttgtaaggaccgg
attagcagttcaagctacatgcagtattctcttttgaccatgcaatataaatcaggatta
gatgtagagagtacaaatgagaggattttggagaagaaagtccctattgaagttataatc
ccaaaagctagagttgaagatgaagactttttgttttccatgaggcttcgaatagggggg
aagccatcaggatcaacagtcataatatctggcgatggaacagcgactgtctcccattat
catagaaacgctacacgtctctatcaatttgatttaccatatgacgctggaaaagtatta
gatgcttcagttcttccttctgcagacgattatgaagaaggtgcgtgggttgtattaaca
gagaaagcaggaatatgggtaataccagagaaggctgtcatacttggaggggttgaacca
cctgagcggagcttgtcacgcaaaggcagctcaaatgaaagatctgcacaagaagagaca
aggaatcttacttttactggtaattttgctccaagaagggctagctctgaagcatggggt
tctggagatagacaaagggccgctttgagtgggattacacgtcgaactgcacaagatgaa
gaatcagaagctttactgaatcgttttttcaatgaatttttgtcatctgggcaagttgac
gggtcacttgaaaagctagaaacttctggttcatttgaaagggatggagaaaccaatgtt
tttgtgcggatgagcaagtcaatcattgacaccttagctaaacattggacaacaaccaga
ggtgcagagattttgtccatggccgttgtttccacccaactcttggaaaaacaacagaag
catcaaaagttccttcactttcttgccttatccaaatgccacgatgagctgtgttccagg
cagagacatgccttgcaaattattttggagcatggtgaaaagttatctgcaatgattcag
ctgagggaactgcaaaatttgattagccagaaccgctcaactggtgttggatcctcaaat
tctaatgtagatattcagatgtcaggtgccctttgggacatgatacagttagttggtgag
agagctcgccggaacactgtcctcctgatggacagagataatgctgaagtgttctacagt
aaggtttcagatcttgaaaatttcttttactgttcagatgcagagttggaatatgttata
agaccagagcatctgcttgcaatccagatccagagggcgtgtgaactctcaaatgcatgt
gtttccataattagaacatgctttgactataagaatgagaaccatttatggtatccacct
cctgaaggtttaacaccttggtattgtcaacctgttgtccggaagggaatatggagtgtt
ggttctgtcttgcttcagttcttaaatgatacatcagggcttgataaaacagtaaagtta
gagttgtataatcatttagaagcactgaccgaagtgctacttgaggcatattctggtgct
gttactgctaaaattgagcgtggagaagaacataaaggtctattaaatgaatattgggag
cgacgagatgcactacttgaatctctttatcaccaagttaaagaatttgaagctacctat
aaggattctattgtagtagctgaagagttcaatgaagaagccactatgaagattacttcg
catctgctatcaatcgctaaacgacacggatgctacaaagttatgtggacaatatgctgt
gatgtaaatgactcagagttactgagaaatgttatgcatgagagttcgggatctactggt
ggatttagtgactatgtcttcaagaaacttcatgaaagcaaacaattctctgagttgtta
aggctaggggaagaatttccagaagagctgtcctttttcgtgaaggagcatccagatctt
ctttggcttcacgatttgttccttcatcatttttcctctgcttcagaaacacttcatgca
ttggctctcacacaaaacaagcagtctactgcagtgatagaagagaacgagcaggtggat
atgaagttgaaactgaaagacagaaagaatcttttatatctatctaagattgcagccttt
gcagctggcaaagatgccggtactcaggtgaaggttgatcgcattgaggctgatttgaag
attcttaaattgcaggaggaagtaatgaaacatttcacttcacttgaagataaggaacct
gtggatgatcagctgcttcatccagaagacttaattaaattgtgcttggaaggtgaagag
ccggagttctcgttgtggacctttgacgtgtttgcatggaccagttcctcatttcgcaag
agccacagaaaacttttggaggattgctggaagaaggctgccagtcaggatgattggagt
aaattccatgattcatactcggttgaaggatggagtgacgaggaaaccgtacagaacctg
aaaaatactgtacttttccaggcttcaagcaggtgttatgcaccccaaagtcaaactttt
gaagaagggtttgaccaggtattgcctttgagacaagaaaacatggagacttcaactttg
ggggatatgagctcttcagttgaaacaatattgatgcagcacaaagattttccagttgcc
ggcaagttgatgctaatggcagtcatgttgggtagtgagcatagtggtgataacagaatt
gaagaagggccttctcctatggaatag
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