KEGG   Medicago truncatula (barrel medic): 11436987
Entry
11436987          CDS       T01716                                 
Name
(RefSeq) UBP1-associated protein 2A
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    11436987
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mtr03019]
    11436987
   03041 Spliceosome [BR:mtr03041]
    11436987
Messenger RNA biogenesis [BR:mtr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     11436987
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     11436987
Spliceosome [BR:mtr03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    11436987
SSDB
Motif
Pfam: RRM_1 RRM_7 Nup35_RRM Cut8
Other DBs
NCBI-GeneID: 11436987
NCBI-ProteinID: XP_003624837
UniProt: Q2HUH7
LinkDB
Position
7:complement(41085428..41091936)
AA seq 490 aa
MVRKRKLVKASQQEEPPLKQHQPEPKPEPVPEPEPEPYIPGEEYEEVEEEVEYEEVEEEV
EEEEEEEEEEEEEEQQIQVEEDDEPIQKLLEPFSKEQISSLLCEAASKHRDVADRIRKIA
DGDASHRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKRRSG
ARNALKEPQKKIGNRMTACQLASIGPVQQTPVVAAAPAPLVVAGSEYTQRKIYISNVGPE
LDAQKLFGFFSRFGEIEEGPLGLDKVTGKPKGFCLFVYKSAESARRALEEPHKEFEGHIL
HCQKAIDGPKPTKIQHQPQQQQQHVNSVNHLNQLNPLSQRTQFQRHDNVGFMGGSSVAVS
QPGHLMAPAGPVTGYNQAAASASAAQGLNPALTPALGQALTALLASQGATLGLGNLLGSL
GVSSAVNPGVPAAGHGVQSGYSAQPTISPTVMGAYGNTVPQAGLQGLYPNQQLGQGGSGR
GQYGGAAPYH
NT seq 1473 nt   +upstreamnt  +downstreamnt
atggtgagaaagagaaaactcgttaaagcttctcaacaagaagaaccaccgctcaaacag
catcaaccggagcctaaaccggaaccggtacccgaacccgaacctgaaccatacatcccg
ggcgaagaatacgaagaggttgaagaagaagttgaatacgaagaagttgaagaggaagta
gaggaggaggaagaggaggaagaagaggaagaagaagaggaacaacaaattcaagtagaa
gaagacgatgaaccgatccagaagcttctagaacctttctcaaaagaacagatctcgagt
cttctttgcgaagcggcttcgaagcatcgtgacgttgcggatcggattcggaagattgct
gatggtgatgcttctcatcggaaaatatttgttcatggtttgggatgggatactacttca
gcaacgctgattaatgccttttcgcagtacggtgaaattgaggattgtaaagctgttacg
gataaggtttcagggaaatctaagggttatggatttattttgttcaagagaaggagtgga
gcgaggaatgcgttgaaggagccgcagaagaagattgggaataggatgactgcgtgtcag
ctggcgtctattggaccggtgcagcaaactccggtggtggcggcggcgccagcgccgttg
gtggtggcgggttcggagtatacgcagaggaagatttatataagtaatgttggacctgaa
ttggatgcacagaagctgtttggttttttttcgagatttggagagattgaggaaggaccg
ttagggcttgataaggtgacggggaagccgaaagggttttgtttgtttgtgtataagagt
gctgagagtgcaaggagggcgttggaggagccgcataaggagtttgaggggcatattttg
cattgtcagaaggcgattgatggtcctaagccgacaaagatacaacatcagccacagcag
caacagcaacatgtgaattcggtgaatcatttgaaccaattgaatccattgagtcagagg
acgcagtttcagagacatgataatgttggatttatgggtggaagtagtgttgcagttagc
caaccagggcacttaatggcaccagcaggaccagtaaccgggtacaatcaggcggctgct
agtgcttctgctgcacaggggctgaaccctgcactgactcctgcgcttggacaggcgttg
acggcgttgcttgcttctcagggtgctactttggggctgggtaatttactggggagtctt
ggagtgagtagtgcggttaatcccggtgttcctgctgctggtcatggagttcagagtgga
tacagtgctcagcctaccataagtccaacagtgatgggagcatatgggaatactgtacca
caggctggattgcaggggctatatccaaatcagcagcttggacagggtggttctggaaga
gggcaatatggtggagccgcaccttatcactag

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