Medicago truncatula (barrel medic): 11439947
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Entry
11439947 CDS
T01716
Name
(RefSeq) actin cytoskeleton-regulatory complex protein PAN1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03013
Nucleocytoplasmic transport
mtr03015
mRNA surveillance pathway
mtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
11439947
09122 Translation
03013 Nucleocytoplasmic transport
11439947
03015 mRNA surveillance pathway
11439947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11439947
03041 Spliceosome [BR:
mtr03041
]
11439947
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
11439947
Spliceosome [BR:
mtr03041
]
Complex C
Other components
EJC/TREX
11439947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
Motif
Other DBs
NCBI-GeneID:
11439947
NCBI-ProteinID:
XP_003630082
UniProt:
G7LAF9
LinkDB
All DBs
Position
8:42298046..42303140
Genome browser
AA seq
761 aa
AA seq
DB search
MLSTYPILNDQPIDQLNVTDVNDEVKSTKLVTKGLKEDLINSLDEAVTIESVDAEVSKKD
EVDGFIGNTVELKDADRETVVDAVVDTGVMKSSESVESDEEGNSAVVHPTDTENDEKIPD
VVNNDSGKSGKQYGITKPVDNDNSAMVEQEVEQMDLSAGADSANVAGDLIHSSTRGTPVT
VTESVLTEVVVSGQEDSCSAKPRNGHGQDFVTKQEDKESNVRLSNEESKPELECDLKPPC
EHLMPNSLLLENQVSEVNPSLGSQVRFDSVSSNFVSINQKNEIKDTIIANNVKLEQEIVR
SEMVEEPSSKIDVPVSDESHSMDVEELDEKKASAEENVSDNRSPDMNKTNISEDVGYPEK
LNLDGSSGDDSMEEDFPEEGKQFDSNFNVDELREKGESVELPVVNEERDAIAVGDGLSSE
EGGTQHNNNIPSVSLVKKQKFQDQTSVENNEPPKRQKRWKSETVKGSDSQMSTVRPATAP
KGEPIALKRNLSWSDSSAIDDAPKERIVPPSQRPPTNSLRIDRFIRPFTLKAVQELLGKS
GNIISFWMDQIKTHCYVSYSTVEEATETRDAVYNLQWPPKGGRLLVAEYVEPQEVRMKLE
PPPPVAFANNDSTVPPVATTSLPEPLPYQHKEQPPIPVTLPPPPPLSKLPPATREQLPPP
PPLSKLPPAAREHPPPPPPSAKLPPAARERLPLPPPLSKLPPAARERLPPPSPLPEKVDR
PILTIDDIFRKTISTPQIYYSPLSEEQVAAKLAALCRSIKQ
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcgacatatccaattcttaacgatcaacctattgatcaattgaatgttactgat
gtgaatgatgaggttaagagtacaaaactagttacaaaaggtttaaaggaagatttgatt
aactctttggatgaagccgtgaccattgaaagcgtggatgctgaggtttccaagaaggat
gaggttgatggtttcattggaaatactgttgagctaaaggatgcagatagagagactgta
gttgatgcagtagttgacacaggtgtaatgaaaagttccgaaagtgttgaatcagatgaa
gagggtaacagtgcagtagttcatccaactgatacagaaaatgatgaaaagattccagat
gttgtgaacaatgacagtggaaagagtggtaagcaatatggtattacaaagccggttgac
aatgataatagtgcaatggtggaacaagaagtggaacaaatggatttatcagctggtgcg
gattctgcaaatgtggcaggggacctaattcattcttctactagaggtacccctgttaca
gtcaccgagagtgtcttaacagaagtagtagtcagcggtcaggaggattcatgtagtgca
aagccacggaatggtcatggtcaggatttcgtaaccaagcaggaggataaggagtcaaat
gtgaggctgagtaatgaggagtcaaagcccgagctggagtgtgacttaaagccaccttgt
gagcatctcatgcccaactctttgcttcttgaaaatcaggtatctgaggtcaaccctagt
ttagggtcacaagtaagatttgattctgtttctagtaattttgtgtcaattaatcaaaag
aatgaaataaaggatactataattgctaataatgtcaaattagaacaagaaattgttagg
tcagagatggtggaagaaccatcatcgaaaattgatgtccctgttagcgatgaatcacat
tcaatggatgttgaagagctagacgagaaaaaggcatctgctgaggaaaatgtcagtgac
aacagaagtccagacatgaacaagaccaatatcagtgaagatgttggttatccagaaaag
ttaaacttggatggaagttctggtgatgattccatggaagaggattttccagaggagggc
aagcaatttgattccaattttaatgttgatgaacttagagaaaagggggaaagtgttgaa
ttgcctgttgtgaatgaggagcgtgatgctattgcggtgggagatggtctatcctcagaa
gaaggtggtacccagcacaataataatattccttctgtttctcttgtcaagaaacaaaaa
tttcaggatcaaacatcagttgagaataatgagcctccaaaacgacaaaaaaggtggaaa
tctgaaacagttaaaggttcagattcacaaatgtctactgtcagacctgctactgcacca
aagggtgagccaattgctttgaagcgcaatttgtcttggtctgattcctcagcaattgat
gatgcgcccaaagaacgcatcgttccaccatcacaaaggcccccaactaattccctcagg
attgatcgtttcatccgaccttttaccttaaaagcagtgcaagaacttcttggtaaatct
gggaatatcatcagtttttggatggaccaaataaaaacccattgctacgtcagttactca
actgttgaagaagccactgagacccgagatgctgtttataatcttcaatggcctccaaag
ggtggacgccttttagttgctgagtatgttgaaccccaagaagtgagaatgaagctagaa
cctcctcctcctgttgcctttgccaacaatgattcaacagttcctcctgtagcaactacc
tcactgccagagcctttaccctatcagcacaaggagcaacctcccattcctgtcacactt
cctcctccaccgcctttgtcaaagctcccgccagcaactagagaacaacttccaccacca
ccacctttgtcaaagctcccaccagcagctagggaacatcctccacctccaccaccttcg
gcaaagctcccgccagcagctagagaacggcttccactgccgccaccattgtcaaagctc
ccaccagctgctagagaacggcttccaccaccatcaccccttccagagaaagttgaccga
cctattcttacaatcgatgatatctttcgcaaaaccatatcaactcctcaaatctactat
tcaccgctatccgaagagcaagttgcagcaaaactggcggcactgtgcagaagtattaag
cagtag
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integrated database retrieval system
