Medicago truncatula (barrel medic): 11442951
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Entry
11442951 CDS
T01716
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1A
KO
K15559
regulator of Ty1 transposition protein 103
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtr03021
]
11442951
Transcription machinery [BR:
mtr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
11442951
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
Nuf2_DHR10-like
Motif
Other DBs
NCBI-GeneID:
11442951
NCBI-ProteinID:
XP_003622057
UniProt:
G7L125
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Position
7:9303400..9313385
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AA seq
527 aa
AA seq
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MGSTFNPQILVEKLAKLNSSQTSIETLSHWCIFHMNKAKQVVETWAKQFHSSPREKKLAF
LFLANDILQNSRRKGSEFVGEFWKVLPDSLRDVIQNGDDNARNQARRLIGIWDERKVFGS
RGQILKEEFVGRHAENNNRDVKPMNAKPTNVKPMNVKLRPSAGNALDRIVSGYQYIYGGQ
TDEDAVLSKCQNAISSLEKVDKEIDHDSNSGKFHGPAVVNELQGHNGILKDCIDQLTAIE
SSRASLVSHLREALQDQEFKLGQVRSQIQAARVQWEHSNNTCQQLLNGNNIQSLVEQSSK
EIQTSMTPASFISGGEQSAPLMYSPQVMFSQNSGHSEEDPRKSAAAAVAAKLTASTSSAQ
MLSYVLSSLASEGVIGNQMTGSSADYHAEKRTKLENDQSYVPSQNPQQPLPPFSLSEPTQ
TSNQQSTPNEPPPPPSSSPPPLPPLPPTPQQYPVPQFMQNVGSVNNMAYSYGVMQQPSMA
TYPAVGVSMNNISPYTPQMNAYQGFQGPDGNYYNQPSSMPMVPISRQ
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgggtagcacattcaatccacagattttagtggaaaaactagccaagctgaatagctcg
cagacaagcatagagactttgtcacattggtgcatatttcatatgaacaaagccaaacaa
gttgtcgaaacgtgggctaaacagttccattcctctcctcgtgagaagaaattggcattt
ctgtttcttgcaaatgatattttacaaaacagcaggcgaaagggttctgaatttgttggt
gaattttggaaggttcttccagattctcttcgagatgtcattcaaaacggagacgacaat
gcaaggaaccaagcgcgtcgactgattggtatatgggatgaaagaaaagtttttggttct
cgtggtcaaattcttaaggaagaatttgttgggaggcatgcggaaaacaataaccgtgat
gtgaaacctatgaacgcgaaacctacaaatgtgaaacctatgaacgtaaaactgaggcca
tctgccgggaatgcattggacagaatagtttcaggctatcagtatatttatggagggcag
acagatgaagatgctgtattaagcaaatgccagaatgccattagttctcttgagaaagta
gataaggaaatagatcatgatagtaattcagggaaattccatggacctgcagtagtgaat
gaactccaggggcataatggcatactaaaggactgcattgatcagttaacagcaatagaa
tcatcaagagccagccttgtctctcacctgagagaggctcttcaggatcaggaattcaag
ctgggtcaagtccgtagccagattcaggctgcacgtgttcagtgggagcattccaacaat
acctgccaacaattactgaatggcaacaatattcagtcattagttgaacaaagctcaaag
gaaattcaaacctccatgacacctgcaagttttatctctggcggggagcagtcagccccc
ttaatgtattcaccacaagtgatgttttctcaaaattctggacacagtgaggaagatcca
cgcaagtctgcagctgctgcagtggcagcaaagctgactgcttccacatcctctgcccag
atgctgtcttatgtgctatcctctttagcatcagagggtgtcataggaaatcagatgaca
gggtcttctgctgattatcatgccgagaaaaggacaaagcttgagaatgaccaatcttat
gtgccatctcagaatcctcaacaaccattacctcccttttcactttctgaacctacccaa
acatccaaccagcaatctactccaaatgagccaccacctcctccctcatcatcacctccc
ccattacccccactgccaccaacacctcaacaataccctgtgccgcagttcatgcagaat
gttggatccgttaacaatatggcatatagctatggcgtgatgcaacagccatcaatggca
acctatcctgcagttggggtttccatgaacaacatatctccttatacacctcaaatgaat
gcttatcagggttttcaggggcctgatggaaattactacaaccagccctcctcaatgcct
atggtccccatttctcgccaataa
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