Medicago truncatula (barrel medic): 11443981
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Entry
11443981 CDS
T01716
Name
(RefSeq) flowering time control protein FY
KO
K15542
polyadenylation factor subunit 2
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
11443981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11443981
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
11443981
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
eIF2A
NBCH_WD40
WD40_like
TFIIA
Motif
Other DBs
NCBI-GeneID:
11443981
NCBI-ProteinID:
XP_003627809
UniProt:
A4Q377
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All DBs
Position
8:14647003..14660384
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AA seq
745 aa
AA seq
DB search
MMYNDPHNPQHQQHQQHQQQQQQQQQQYQQHQQQQQPPHFHHQQQQQQSGPGPDFHRGPP
PPMPQQPPPMMRQPSASSTNLGSEFLPGGPPGPPGPPPHYDVHNDSHGAKRMRKLTQRKA
VDYTSTVVRYMQIRMSQRDSRDRTVLQPTPAAAIDMLPAAGYSDNPSTSFAAKFVHTSLN
KNRCAINCVLWTPTGRRLITGSQTGEFTLWNGQSFNFEMILQAHDSAIRSMIWSHNDNWM
VSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQ
EECSLTGHGWDVKSVDWHPTKSLLVSGGKDNLVKLWDAKSGKELSSFHGHKNTVLCVKWN
QNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTTLAWHPFHEEYFVSGSYDGSIFH
WLVGQDTPQIEISNAHDNNVWDLAWHPIGYLLCSGSSDHTTKFWSRNRPGDSARDSRYNN
GIQGYAEQNPVAGRVPGHFVMPEGPTTPGPFPPGLMTRNEGTIPGVGVAMPLSIPSFDGS
QGEQKQPHPGSIGAPPLPPGPHPSLLNPNQQQPFQQNPQQIPQHQQQLQQHMGPLPMPPN
MPQIQHSSHSSMLPHQHLPRPPPQMPHGMPGSLPVPTSHPMPIPGPMGMQGTMNQMGPPM
PQGHYGGMNQMHSGSLSSSGGPPMGGFPNNMQGPPNNNYPQGAPFNRPQGGQMPMMQGYN
PYQSGNQPGMPPNSQQGGPHSQMPQ
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacaatgaccctcataaccctcaacaccaacaacaccaacagcaccagcagcaa
cagcaacaacaacaacaacagtatcagcaacaccagcagcagcagcagcctccgcatttt
caccatcagcagcagcagcagcagtcaggtcccggtccggatttccaccgtggacctccg
ccgccgatgcctcaacaacctccgcctatgatgcgccaaccttccgcttcttcgacgaat
ctcggatcggagtttcttcctggtggtccccctggtccccctggtcctcctcctcattac
gatgttcataatgatagccatggtgcaaaaagaatgagaaagctcactcaaaggaaggca
gttgattatacgagcacagttgtgcgctatatgcagattcgtatgtcacagcgtgattcc
agagataggacagtacttcaacctacgccggcagcagcaattgatatgttgccagcagct
ggctattcagacaatccatccacaagctttgctgctaaatttgttcatacatctctaaat
aaaaatcgttgtgctattaattgtgttctttggactcctacaggccggcgtcttattact
ggctcacagaccggggaatttactctttggaatggacagtcttttaatttcgaaatgata
cttcaggctcatgattcagcaatcagatccatgatctggagtcacaatgacaactggatg
gtctctggtgatgatgggggtgcaataaagtattggcagaacaacatgaacaatgttaaa
gccaacaaatctgctcataaagaatcagtccgtgacttaagtttttgtaggacagatttg
aagttctgttcgtgttctgatgataccacagttaaagtttgggatttcgcacgctgtcaa
gaagagtgttcattaaccggccacggttgggatgtgaagagtgttgactggcatccaaca
aaatctctattagtatcaggtgggaaagacaatcttgtgaaactttgggatgctaaaagc
gggaaagagctctcctcctttcatggccacaaaaacaccgtgctttgtgtgaaatggaat
caaaatggaaactgggtattaacggcttctaaagatcaaataataaagctgtatgacata
agagcaatgaaggagcttgaatcattccgtggacaccggaaggatgttactactttggct
tggcatccgttccatgaagagtactttgtcagtgggagttatgatggttccatcttccat
tggcttgttgggcaagatactcctcaaattgaaatttccaacgctcatgataataatgtg
tgggatcttgcatggcatcctattggatatcttctttgcagtggtagcagtgatcataca
acaaagttttggtctagaaacaggccgggagatagtgcccgtgatagtagatataacaat
ggcattcaaggatatgccgagcaaaatcctgttgctggtcgtgtacctggccattttgta
atgcctgaaggcccaacaactccaggaccatttccccctgggctgatgactcgaaatgag
ggtaccattccaggtgttggagttgcaatgcccttatctattccttcttttgatgggtct
caaggggagcagaagcagccccatcctggttcaataggtgctcctcctcttcccccgggt
ccacatccctctcttcttaaccccaaccaacaacaaccattccaacagaatccacagcag
attccacaacatcagcaacagctacaacaacatatgggccctttgcctatgcctccaaat
atgccacagatacaacactcttcccattcctctatgctccctcaccaacatttgccccgc
cctcccccccaaatgccacatggaatgccaggatctttaccagtgcctacatctcatcca
atgccaattccaggacctatggggatgcaaggtacaatgaatcagatgggccctccaatg
ccacaaggtcattatgggggcatgaatcaaatgcattcaggatccttgtcttcaagtgga
ggaccacctatgggaggcttcccaaacaatatgcaagggccaccaaataacaattatcct
caaggtgctccatttaacagaccacaaggtggacaaatgcccatgatgcaaggttataat
ccttaccagtctggaaatcaacctgggatgcctccaaactcacaacaaggtggaccacac
tctcaaatgcctcaatga
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