Medicago truncatula (barrel medic): 120576913
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Entry
120576913 CDS
T01716
Name
(RefSeq) uncharacterized protein LOC120576913
Organism
mtr
Medicago truncatula (barrel medic)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RVT_1
RT_RNaseH_2
RT_RNaseH
Integrase_H2C2
RVP_2
Retrotrans_gag
rve
gag-asp_proteas
Asp_protease_2
Chromo
Ty3_capsid
Peptidase_A2B
zf-H2C2
Motif
Other DBs
NCBI-GeneID:
120576913
NCBI-ProteinID:
XP_039683515
LinkDB
All DBs
Position
7:complement(3827521..3831961)
Genome browser
AA seq
1402 aa
AA seq
DB search
MAPTNSERLDELSEKVDTILNQLAILTTTPSPPSPPPPPPPNPPPPHMKLDVPRFDGSDA
MGWIFKINQFFDYHQTSEEDRLTVASFYMEGQALSWYQWMHRNQQITSWYGLLQALETRF
APSYYDDPSSALFKLTQRSSVNQSLHEVERLANRIVGLPQPFLLSCFISGLTPDIRREVQ
ALRPMNLSQATALAKLQEDKLTDRRHHFKGKLHNPSPLSVVPSSSTLPPLLPAPTPSRVN
FRKLSTEEMASRREKGLCYNCDETFTPQHKCKGRFFLLISDDGFDTDPPTQTDTTTNDQD
INPTTIIPEPPDQEAHISFHALSGGTDPATIRIRGHISNHPVTVLIDGGSTHNFVQTRIA
KFLELPSHPTNTLKVMVGNGSILECHSLCSSIPISLQTQTFNIDFYSLPLCGADVVLGAP
WLRSISPVLMDYTSLTLSYTSNNQTVTLTGIKPTVPNAISAQQLKRCVQTHSASELFHIQ
AVTRPATQNSPDPHPISPIQNLLHRFQTVFTEPTNLPPSRPSDHRITTLPNSKPINVRPY
RYPYFQKNEIERQIQTMLAAHIIRPSHSSFSSPVLLVKKKDGTWRFCVDYRALNNITIRD
RFPMPTIDELLDELGGASWFSKLDLRQGFHQIRMHEEDIPNTAFRTHQGHYEFRVMPFGL
SNAPSTFQGTMNDLFRPFLRRFVIVFFDDILVYSTSLKEHLQHLEQVFQTLVNGNFFLKL
SKCLFAQRQLEYLGHMVSTDGVFPEPSKIQSILNWPLPKSVTELRGFLGLTGFYRKFVKG
YASIALPLTNLLRKDSFIWSDEATAAFQALQKAMTQTPTLALPNFSKPFVLETDASGLAM
GAVLMQDSHPIAFFSKPFCPRLRRSSTYIRELHAITTAVKKWRQYLLGHPFVIFTDHQSL
KELLTQVIQTPEQQLYLSKLMGYDYSIQYKSGKTNVVADALSRHPETTSEEYHASPLGGH
MGITKTLARVQTNFWWEDMRNDVKTFITECLICQQMKYETRKTPGLLQPLPIPNAIWEDL
SLDFITGLPPSNTHTAILVVVDRFSKGVHLAPLAPNFTAHRVATIFFNNICKLHGIPRSL
VSDRDPIFLSKFWRDLFSLCGTKLRMSTSYHPESDGQTEVYNRVLEQYLRSFVHSKPSQW
SKFLSLAEWSYNTSVHSSTGFSPFQITFGREPPSIPRYLQGSSTIEAVDSMLDNRQQLIE
KLRRNLLKAQDKMKHFADKKRREVEFIPEQWVYVRLRPYRQKSLSDAAYTKLSKRFYGPF
RITERIGKVAYRLELPPQSRIHPVFHCSLLKPHHGPVTYSNDLPPSAIENHPLVEPLALI
NQKLDTTTDPPTPMVLVQWKGLAPEDTSWEDWNMLQQKYHLEDKVIFPDPGDVSQSPTPT
AAQLNTKPKRLIKKPAHLKDYV
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggcacccacaaactcagaacgccttgatgaactatcagaaaaggtcgataccatcctc
aaccaactcgccatactcaccaccaccccatctccaccatcaccaccacctccaccacca
ccaaatccaccccctcctcatatgaaactagatgtacccagatttgatggctctgatgca
atgggctggatattcaaaataaaccagttttttgactaccatcagacctctgaggaagat
agactcaccgttgcttccttctacatggaaggtcaagcactgagctggtaccaatggatg
cataggaaccaacaaatcacttcttggtatggtttgttgcaagcccttgaaacccgtttt
gccccatcctactatgacgacccatccagtgctctgttcaaactcactcaacgttcttct
gtcaaccaatctctccatgaggttgaacgccttgcaaatcgcatcgtcggactcccacaa
ccgttcctcttgagctgttttatctccggtctcacgccggatatccgccgtgaagttcag
gctctccgaccgatgaacctttctcaggccaccgcccttgcaaaactccaggaagacaaa
ctcacagaccgccggcaccactttaagggtaagctccacaacccctcacctctttctgtg
gttccttcctcttcaaccttaccaccgctactccctgctccaaccccttcacgtgtcaat
tttcgcaaactctcgacggaggagatggcctctcgtcgtgaaaagggactatgttataac
tgtgatgaaaccttcaccccacaacacaagtgcaaaggccgattcttcctcctcatttcc
gatgacggtttcgacaccgacccacctacacaaactgacactactaccaatgaccaagat
attaacccaaccaccattatccctgaaccaccagaccaagaggctcacataagctttcac
gccctttctggcggtaccgacccagccaccattcgaatacgaggccacatctcaaaccac
ccagttacagtccttatcgatggcggtagtactcacaattttgtgcaaactcgtatagca
aaatttttagagttgccttcacatccaacaaatacccttaaagtcatggttggtaatggt
agcatactggaatgtcatagtttatgttcatccattcccatctcattacaaacacagacc
ttcaatattgatttttactccttaccactttgtggagctgacgtggtgttaggagcccct
tggctgagatctatcagtccagtcctcatggattatacctccctcacactttcctacacc
tcaaataaccaaacagttaccctcacaggaatcaaaccaactgtgcccaacgcaatctca
gcccaacaactcaaaagatgtgtccaaacccattcagcttctgaactattccatatccaa
gctgtaacccgacctgcgacccaaaactcacccgacccacacccaatctcaccaatccaa
aacctactccatcgtttccagacagttttcactgaacccaccaacttacctccatcacga
ccctcagaccaccgcatcaccacactccccaactcaaaaccaatcaatgtccgcccatac
cgctacccatatttccagaaaaacgaaatagaacgacaaattcaaaccatgttggccgcc
cacatcatccgaccaagccatagttccttctcctcaccggtgctgctcgtaaaaaagaaa
gacggtacatggcgtttctgcgtcgattaccgtgcactcaacaacatcaccatccgcgac
agattccccatgcccaccatcgacgagttactcgacgaacttggcggagcttcatggttc
tccaaactagacctcagacaaggctttcaccagatccggatgcatgaggaagacatccca
aatacagcattccgcacccaccaagggcactatgaatttcgagtcatgcctttcggcctc
agcaacgcaccatccactttccaaggcaccatgaatgacctgttccgtcccttcctccgc
cgctttgtcatcgtcttcttcgacgatatactagtctacagcacatccttaaaggagcat
cttcagcatttggaacaagtattccagaccttagtaaatggcaatttcttcttgaaactt
tctaaatgcctatttgctcagagacaacttgaatacttgggtcacatggtctccactgat
ggcgttttcccagaaccttccaaaatccaatcaatactcaactggcccctccccaagtca
gtcactgaattaagaggattccttgggttaactggattctacagaaaattcgtcaaaggt
tacgcatccatagcactacccttaaccaatctacttcgtaaggactcatttatctggtcc
gacgaagctactgctgctttccaagccctccagaaagcgatgacccagactccgacctta
gccttaccaaacttctccaaaccatttgtcttggaaacagacgcatccggcctggccatg
ggcgccgtactgatgcaagattctcaccctatcgccttcttcagcaaacccttttgccct
cgcttacgacggtcttccacttacatcagagaactccatgccatcaccaccgccgtaaag
aaatggcgccaatacttacttggccacccctttgtgatttttaccgatcaccaaagcctc
aaagagttattaacccaagtcatccaaacaccagagcagcaactctacttgtcaaaactg
atgggatatgattactcaattcaatacaagtccggtaaaactaacgtcgtagccgatgca
ctctcccgccatccagagacaacctcagaggaataccatgcttcccccttgggcggccat
atgggtatcactaagacgcttgcgagagtacaaaccaatttctggtgggaggacatgcgt
aatgatgtcaagacattcattactgagtgcttaatttgccaacagatgaaatatgaaact
agaaaaacccctggccttctccaacccctacccatcccaaatgccatttgggaagactta
tcactagatttcatcaccggcttaccaccgtccaatacccacactgccatcttagttgtc
gttgatcgcttctccaagggcgtccacttagccccccttgcacccaactttactgctcac
cgggttgccactatcttttttaacaacatttgcaaattacatggcattccccgcagtctt
gtctccgacagggacccaatttttctcagcaaattctggcgtgacctgttctctctatgc
ggtactaagctacgcatgagcacctcctatcatcccgaatctgatggtcaaacagaggtg
tacaaccgcgtcttggaacaatacttacgctcatttgtccactccaaaccatcccaatgg
tcgaaatttctctccttggcagaatggtcctataatacttcagtgcattcctcaactggg
ttctctcccttccaaattacctttggcagagaaccaccttctattcctaggtaccttcag
ggatcatctacaattgaagctgtagattccatgctggacaaccgacaacaactcattgag
aaactgcgccgcaatctgctgaaggcacaagataagatgaaacactttgctgacaagaaa
cgcagggaagttgaatttattccagaacagtgggtttatgtccgcctccgcccttatcgt
cagaagagtctctcagatgctgcctacacaaagttatccaaacgcttttatggacccttc
cgcatcacggaacgcattggaaaggttgcctaccgtcttgaattaccaccacaatccaga
attcaccccgtcttccattgttctctcctcaaaccacatcatggacctgtcacatactcc
aatgacctgccaccttctgctattgagaaccaccccttggttgaaccgcttgcactaatt
aatcaaaagctggacactactaccgatccacctactcctatggtcttggttcaatggaaa
gggctcgcccctgaggatactagctgggaggattggaacatgcttcaacagaaatatcac
cttgaggacaaggtgatttttccagacccaggtgatgttagccaaagcccaactccaact
gcagcccaactgaacactaagcccaaaagactcatcaagaagccagctcacctcaaggac
tatgtgtga
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