Medicago truncatula (barrel medic): 120577005
Help
Entry
120577005 CDS
T01716
Name
(RefSeq) uncharacterized protein LOC120577005
Organism
mtr
Medicago truncatula (barrel medic)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RVT_1
RT_RNaseH
RT_RNaseH_2
RVT_3
Retrotrans_gag
rve
Integrase_H2C2
RNase_H
Ty3_capsid
Asp_protease_2
gag-asp_proteas
rve_3
Gag_p24_C
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
120577005
NCBI-ProteinID:
XP_039683826
LinkDB
All DBs
Position
7:complement(20243166..20249887)
Genome browser
AA seq
2143 aa
AA seq
DB search
MPTHQVTHVPPPPVRAPPVVMTYSAPMIHTAPQNEEPIFHSRSMKAYGQVEDLQEKYDEM
YREMKALRGKERFGKTAYDLCLVPNVQIPHKFKVPDFEKYKGNSCPEEHLTMYARRMSAY
AKDDQVLIYYFQESLASPASKWYMNLDKTKIQTFHDLCEAFVEQYNYNVDMAPDRSDLQA
MTQGVKETFKEYAQRWRDVAAQVSPRIEEKEMTKLFLKTLGQFYYEKMVGSTPKNFAEMV
GMGVQLEEGVREGRLVKDGTSTSGTKKYGNHIPRKKEHEVSMVAQGRPYPTYQHIAAITP
AANIIHPPNSKPQFSQYPQHPQQYPQQPYQQNPPHPYQQQQPRPQRTQFDPIPVTYAEVL
PGLLRNNLVQTRPPPPVPERLPAWYRPDQTCDFHQGAPGHNIESCYAFKYAVQRLIKEKK
ITFTDSAPNIQTNPLPNHGAATVNMVEDCQETHHILDVQQIRTPLVPLHAKLCKVNLFKH
DHDGCNECLLNPWGCQKVKDDIQGLLNQGELVVERKCDDVCVITPEEPLEIFYDSRKSVA
APLVICLPGPIPYTSEKAIPYKYNATMIEGGREVPIPPLPSVGNIAEDSRILRNGRVIPL
VFPKKVDAPGTEETRTKNSGAIKDVGQTSGTKSCSDFDEILKLIKKSEYKVVDQLMRTPS
KISIMSLLLNSEAHKGALMKVLEQAFVDHDVTVGQFDGIVGNITACNNLSFSDEELPEEG
RNHNLALHISVNCKTDALSNVLVDTGSSLNVMAKTTYDQLSYKGTPLRRSGVMVKAFDGS
RKNVLGEVVLPITIGPQDFQITFQVMDIQASYSCLLGRPWIHEAGAVTSTLHQKLKFVKN
GKLVTVNGEEALLVSHLSSFSFIGADSVEGTSFQGLAIEEENTKRSESSISSLKDAQKVI
QAGGSPSWGKLIELPENKRREGLGFCPSADLSKPKIVVEPIRGTFHSSGFIHAIIEDNPE
RVPRSFVTQGGSSHNWVAVDVPFIAHLSKLKPNEPVEQHSPMISPNFEFPVYEAEEEENE
EISDEISRLLEQERKTIQPYGEELEAINLGTEEDKKEVKIGASLEASVKKRVIELLKEYV
DVFAWSYRDMPGLDTDIVVHHLPLKPECPPVKQKLRRTRPDMALKIKEEVQKQIDAGFLV
TSKYPQWLANIVPVPKKDGKVRMCVDYRDLNKASPKDDFPLPHIDVLVDSTAKSKVFSFM
DGFSGYNQIKMAPEDKEKTSFITLWGTFCYRVMPFGLINAGATYQRGMTTIFHDMIHKEI
EVYVDDMIVKSITEEQHVEYLLKMFQRLRKYRLRLNPNKCTFGVRSGKLLGFIVSQKGIE
VDPDKVKAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKDQGIDWTED
CQKAFDSIKAYLLEPPILIPPVEGRPLIMYLTVLEDSMGCVLGQQDETGRKEHAIYYLSK
KFTDCESRYPMLEKTCCALAWAAKRLRHYMISHTTWLISKMDPIKYIFEKPALTGRIARW
QMLLSEYDIEYRTQKAIKGSILADHLAHQPIEDYQPIKFDFPDEEIMYLKMKDCDEPLLG
EGPDPESKWGLIFDGAVNAYGSGIGAIIVTPKGAHIPFTARLTFDCTNNMAEYEACIMGI
EEAIDLRIKNLDIYGDSALVINQITGEWETRHPGLVPYKDYARRLLTFFNKVELHHIPRD
ENQMTDALATLSSMYQVNRRNEVPLIHIRRLERPAHVFATEEVVDDKPWFHDIKCFLQRQ
EYPLGASSKDKKTLRRLSVNFFLNGDILYKRNFDMVLLRCVDKHEADLLMHEIHEGSFGT
HSSGHTMAKKILRAGYYWMTMEADCYKHAKKCYKCQIYADKIHVPPTALNVLSSPWPFSM
WGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVVKFIKNHIICRYGVPS
RIITDNGTNLNNKMMKELCDDFKIEHHNSSPYRPQINGAVEAANKNIKKIIQKMVVTYKD
WHEMLPFALHGYRTSVRTSTGATPFSLVYGMEAVLPIEVEIPSIRVLMEAELSEAEWVQS
RYDQLNLIEEKRMSALCHGQLYQNRMKQAFDKKVHPREFKEGDLVLKRILTFQPDSRGKW
TPNYEGPYVVKKAYSGGAMTLQTMDGEELPRPVNTDAVKKYFV
NT seq
6432 nt
NT seq
+upstream
nt +downstream
nt
atgcctactcatcaggtgactcatgtccctccgcctcctgtaagagctcccccagttgtc
atgacttactcagcacctatgattcacactgctccacaaaatgaagaacccatcttccat
tcaaggagtatgaaggcctatggtcaagtggaggatttacaagagaagtatgatgagatg
taccgtgagatgaaagctctccgcggaaaagaaagatttggaaaaactgcttatgacctc
tgtttggtgccaaacgtccagataccccataagttcaaggtcccagattttgagaagtat
aaagggaactcctgccctgaggaacatctaacaatgtatgcaagaaggatgtctgcgtat
gctaaggacgatcaggtccttatttattacttccaagagagcttggctagtcccgcctca
aagtggtacatgaatctggacaaaacaaagatccaaactttccatgatctgtgtgaagct
tttgtagaacaatacaattacaacgtagatatggctccagaccgaagtgatcttcaggcc
atgactcagggggtcaaagaaacattcaaagagtatgctcagcggtggagggatgttgct
gcccaagtcagcccacgtatagaagagaaggaaatgaccaaactcttcttaaaaactctc
ggtcagttctactacgagaagatggtcggaagtacgcccaagaactttgctgaaatggtt
ggcatgggtgtgcagttggaagaaggagtccgagaaggacgtttagtaaaagatggaact
tctaccagtggaaccaagaaatatggcaaccacatcccgagaaagaaagaacatgaggtt
agtatggtggcccaaggaaggccttatccaacctatcaacacattgctgccatcacacct
gctgccaatattattcatcccccaaatagtaagcctcaattctcacaatatcctcaacac
cctcaacaatatccccaacaaccatatcaacaaaatcccccacatccctatcaacaacag
caacctcgaccacaaagaacgcaatttgacccaatccccgtcacctatgcagaggtactt
ccaggattactcagaaataacttggttcaaaccaggcctcctcctccagtaccagaaaga
ctgccagcatggtacagacctgatcagacttgtgatttccatcaaggggccccaggtcat
aatattgaaagttgttatgcctttaagtatgcagtccagaggctaatcaaagaaaagaag
ataaccttcacagactcagcgccaaatattcaaaccaatccattgccaaaccatggtgct
gcaactgtcaacatggtcgaagattgccaagagactcaccatattctcgacgttcaacaa
atccgaacacctttggtcccattacatgccaagttatgcaaagtgaacctctttaaacat
gatcatgatggctgcaacgagtgccttctgaacccctggggttgtcagaaagtgaaagat
gatattcaaggacttttgaaccaaggagaactggtcgttgaaagaaaatgtgatgatgta
tgtgttataactcctgaagagcctttggagatattttacgacagtcggaagtcagttgct
gctcctttagtgatttgcttgcctggtccaataccttatacttctgagaaggcaattcct
tacaaatacaatgccactatgatagaaggtggtcgtgaagttccaataccacctttgcct
tctgtgggaaatattgccgaagatagtagaatattgaggaatgggcgtgttatccctcta
gtgtttccaaagaaagttgacgctccggggactgaagaaactcgaactaaaaattccggt
gcaatcaaagatgtgggtcagactagtgggaccaagtcatgttctgattttgatgagatt
ctcaagctgataaagaaaagtgagtacaaagtggttgatcaactgatgcggactccgtca
aaaatatccataatgtctttattgctgaattctgaggctcataagggagctttgatgaaa
gtcttggagcaagcttttgtagaccatgatgtgactgtgggacaatttgatggaatagtg
gggaatatcactgcatgtaacaatctgagtttcagtgacgaagagctcccagaggaagga
aggaaccataatttggcattgcatatatctgtgaactgcaagactgatgctttgtcaaat
gtgttggtagataccgggtcatcgttaaatgtaatggccaaaacgacctatgatcagctt
tcttacaagggtacacctttgagacgaagtggagtaatggtgaaagcttttgatggttcg
aggaagaatgttctcggagaggtggttctgcctattacaattgggccacaggatttccag
attacttttcaagtgatggacatccaagcatcctacagctgtctactaggccgaccctgg
attcatgaagcgggggcagtaacgtctaccttgcatcagaagttaaagtttgtgaagaat
gggaagctggtaacggtaaatggtgaagaagctttattagtaagtcatttatcgtctttc
tccttcatcggagccgatagcgttgaagggacatcttttcaaggacttgccatagaagaa
gagaataccaagaggagtgagtcatctatctcttctctaaaagatgctcaaaaagtgata
caagctggaggctctcccagctggggaaagttgatagaactgccagagaacaagcgccga
gaaggactgggtttctgcccatcagctgatttgtccaagcctaagatcgttgtcgaacca
atcagaggtactttccacagctctgggttcattcatgcaatcattgaagataatcccgaa
agagtgccacgaagctttgtgacacaaggagggtctagccacaattgggttgctgtagat
gttccttttattgctcatttatccaaattaaaacccaatgaacccgttgaacaacatagc
cctatgatctctcccaactttgagttccctgtgtatgaggcggaagaagaagagaatgaa
gagatttccgacgaaatctcccggctacttgaacaagaaagaaagaccattcagccttat
ggggaagaattagaagcaatcaacttgggtaccgaagaagacaagaaggaggtcaagatt
ggggcatcacttgaggcaagtgtcaagaagcgagtgatagagcttctcaaagaatatgtt
gatgtgttcgcttggtcgtaccgagatatgccgggtctggatactgatatcgtggtacac
catttacctttgaaacccgagtgtccgccggtcaagcagaaattaagaagaacccgccct
gatatggccctcaagattaaagaggaagtgcagaaacagatcgatgcaggtttcctcgtt
acatcaaaataccctcaatggctagccaacatagtgcctgttccgaagaaggatggcaaa
gtcagaatgtgtgttgattaccgtgaccttaacaaagctagtcccaaagatgattttcca
ttacctcatattgatgtactggttgacagcactgcaaaatccaaagtgttctccttcatg
gatggtttctccggttacaatcagatcaagatggcgcccgaagacaaagagaagacgtct
ttcatcacactttggggcactttctgttacagagtaatgccgttcggtttgatcaatgca
ggggctacttatcaaaggggtatgactactatctttcacgacatgatacataaagagatt
gaggtttatgtggatgacatgatcgtcaagtcaatcactgaagaacaacatgttgagtat
ttgctaaagatgttccaacggctaagaaagtacagacttcgtctgaatcccaacaagtgt
acttttggtgttagatccggaaagcttctgggcttcattgttagtcagaaaggtattgaa
gtagatccagacaaggtcaaagccatcagagaaatgccagctccgcaaacagaaaaacaa
gtaagggggtttctcggacgactgaattacatctcccgtttcatttctcatatgactgca
acatgtgggccgatattcaaactcctccgcaaggatcaagggattgattggacagaagat
tgccagaaagcttttgatagcatcaaagcgtacttactagaacctccgattctcatccct
ccagttgaaggaagaccactaatcatgtacctaactgtactagaagattccatgggttgt
gtgctcggacaacaagacgaaactggaagaaaggagcatgccatttattatttaagcaag
aagtttactgattgtgaatctcgctatcccatgctcgagaagacctgttgcgcactagcc
tgggctgccaaacgtctccgtcactatatgattagtcatactacttggttgatatctaag
atggatccgatcaagtacatctttgagaaacctgctttgacaggaagaattgcccggtgg
cagatgttattatccgaatatgatattgagtatcgtacccagaaagcaatcaaaggcagt
atccttgctgatcacttggctcaccaaccaattgaagactatcagcccatcaagttcgac
tttcctgatgaagagattatgtatttgaagatgaaagattgtgacgaaccgctactcggg
gaaggtccagatcctgaatcaaaatggggtctaatattcgacggagctgttaatgcttat
ggtagcggaattggggcaatcattgtcactcctaaaggtgcacacatccccttcacggcc
agactaacgttcgactgtacaaacaacatggcagagtacgaagcgtgtatcatgggtatc
gaagaagccatcgatctgagaattaagaacctcgacatttatggtgactcagcccttgta
atcaatcaaatcacaggagaatgggagactcgtcaccccggcttggttccctacaaagac
tatgcaagacgattactgaccttcttcaacaaagtcgagctacaccatattcctcgtgat
gagaaccagatgacggatgctctggctactttgtcttcaatgtaccaagtaaatcgtcgg
aatgaagtaccactgatccatatcagacgtcttgagagacccgctcatgtattcgccact
gaagaagttgttgatgacaagccatggttccacgatatcaaatgtttccttcaaaggcaa
gagtatccacttggagcatccagtaaagacaagaagactctaagaagattgtctgtcaat
ttcttcctgaacggggacattttatataaaagaaacttcgatatggtgttgctcagatgt
gttgacaaacatgaggcagacttattgatgcatgaaatacacgaaggatccttcggaact
cattctagcggacatacaatggccaaaaagatattgagagcaggttattactggatgaca
atggaagccgactgttacaagcatgccaagaagtgttataagtgtcaaatctatgccgat
aagattcatgtgccaccgactgcactcaatgttctttcctccccgtggccattctctatg
tggggcattgacatgattggaagaattgaacccaaagcttcaaatggacaccgcttcatt
ctagtggctattgactatttcaccaagtgggttgaagctgcatcttatgctaatgtgacc
aagcaggtggtagtcaagtttatcaagaatcatattatttgccgctatggtgtccctagc
cggatcattacagataatgggacgaatctgaacaacaagatgatgaaagaattgtgtgat
gatttcaagatcgaacaccataattcttcgccttacagacctcagataaatggtgctgtc
gaagctgcaaacaaaaatataaagaagatcatccagaagatggtggtgacttataaagat
tggcatgagatgcttccctttgcattacatggatatcgtacttctgtacgcacatcaaca
ggggcaacccctttctctttggtatatggcatggaggcagtacttcccatagaagttgag
attccttcaatacgagttttaatggaggctgaattatcagaggctgagtgggttcaaagt
aggtatgaccaattgaatctgatcgaagaaaagcgcatgtctgctctttgtcatggtcag
ctgtatcaaaataggatgaagcaggcttttgacaagaaagttcatccccgtgaattcaaa
gaaggtgatcttgtgctcaaaaggatcttgactttccaacccgactctaggggcaagtgg
acgcctaactatgaaggcccgtatgttgtcaagaaagcttactcaggcggtgccatgact
cttcaaaccatggatggtgaagaacttccacgtcctgtgaacacagatgcagtcaagaaa
tactttgtctaa
DBGET
integrated database retrieval system
