Medicago truncatula (barrel medic): 120577031
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Entry
120577031 CDS
T01716
Name
(RefSeq) uncharacterized protein LOC120577031
Organism
mtr
Medicago truncatula (barrel medic)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RT_RNaseH
RT_RNaseH_2
RVT_3
RVT_1
Retrotrans_gag
Integrase_H2C2
RNase_H
Asp_protease_2
gag-asp_proteas
Ty3_capsid
eIF3h_C
DUF5712
Motif
Other DBs
NCBI-GeneID:
120577031
NCBI-ProteinID:
XP_039683859
LinkDB
All DBs
Position
7:complement(23613457..23619877)
Genome browser
AA seq
1890 aa
AA seq
DB search
MLAAEQENAQLREELVNLKGEMERMALMMETMMAEREQAAISNSTPVVVVTAAPEGPPQP
SPTITTTIGLTQPLRTDFSSGNLATMGNSGFRPLGPQGPFATPQYSMPSGYPWGMPIATN
GGFGPGATEMPFTQGQQTSAHFQMSQPIPQATMTQAGPTVHVGPQHEEQIYHSDSIMGDD
KAIDWEERFGALEKKMSNMRGKETVVQSIYDLCLVPDVNIPPKFKMPVFEKYQGDTCPQN
HLTMYIRKMIAYKNNVPLLIHCFQDSLTGPAHTWFMGLKGVTTFEQLAEAFMQQYKYNTY
LAPSRKELQSLTQKDKESFKEYAQRFIQKAAQIRPPLDERELSELFYETLSPCYSEKMIV
CASQKFTDLVETGMRIEEWARKGAAVSGSSSGGSLGVPSNGNKKFGNGYPKRNAQEVGMV
AHGGPQPVYPNHPFVANITPQMTAPQNPNYQSPRPQGPAPYYPPLYQPLYNLQQFPQQPY
YPQQPYQQPRPQAPHNQQNQRQQFDPLPMTYGALLPSLLAQNLVQTIPPPRIPDPLPRWY
RPDLHCIYHQGAPGHDVERCFALKKEVQKLISSKELTFTDPDAVAQNNPLPTHGPAVNMI
QDDQEEARILSVGDIKTPLVPIHVKMCKATLFNHNHEACDICLMDPRGCIQVQNDVQGLL
IRRELVVTREPESKDVCVVTPVFRARRPLVINPNSTKPVGTPLVICVPRPTPTTAQKAVP
YKYEGTILEPGSETTSPVAVDNIAENSRILRSGRILPTVGPKSVSVPVDEPVKERNAGKG
KAGEQAKEFDFEDADEVLKLIKKSEYRVVDQLLQTPAKISIMALLSSSGAHRDALKKVLD
QAFVDYDVTLGQFESIVGNVTACNGLTFSDEDLPAEGNKHNQALLISVLCRTDSLSNVLI
DTGSALNVMPKSTLDQLAYSEAPLRLSKVTVRAFDGTRRSVYGEVDLPISVGPHEFQVTF
QVMEIQASFSCLLGRPWIHDAGAVTSTLHQKLKFVSRGKLITVSGESAFLISNLSAFSVI
GGSSSDGPSFQGFSAEESVGKIETCMASLKDARRVIQEGKTEGWGQLVELPENKRKEGIG
FLNSKPGMFDPTRGSFHSAGFIHDSPETNAILDDAPGGVTPVFVTPGGACCNWIAVDIPS
VTPRSKLNISESVEHSDSMLSPNFEVPVYEAVVEEDEEIPNEIKWMLEQERKTIQPHQEE
IEIINLVTEEDKIDIKIGASLDVSVKKRVIEIIREYVDIFAWSCKDMPGLDPDVVEHRLP
LKPECPSIDAGFLVTSEYPQWLANIVPVPKKDGKVRMCVDYRDLNKASPKDNFPLPHIDV
LVDNTAKCKVFSFMDGFSGYNQIRMAPEDREKTSFITPWGAFCYVVMPFGLINAGATYQR
GFIVSQKGIEVDPDKVRAIREMPVPKTEKQVRDQGVKWNDDCQKAFDQIKEYLLEPPILV
PPVDGRPLIMYLTVLEDSMGCVLGQQDETGKKEHAIYYLSKKFTDCESRYSVLEKTCCAL
TWAAKRLRHYMINHTTWLISKMDPIKYIFEKPALTGRIARWQMLLSEYDIEYRTQKAIKG
SILAEHLAHQPIEDYQPIKFDFPDEEVMYLKAKDCDEPVFGEGPDPESGWGLIFDGAVNV
YGSGIGAVLITPKGTHIPFTARLRFDCTNNIAEYEACIMGIEEAIDLRIKKIVIYGDSAL
VINQIKGEWETRHPGLIPYRDYARRLLTFFNKVELHHVPRDENQMADALATLSSMINVNG
HNTVPVINVQFLDRPAYVFVAEAIDDDKPWYHDIQVFLQTQKYPPGASNKDKKTLRKLSS
RFFLNEDVLYKRNFDGVLLRCVDKHEAEKLMREIHEGSFGTHSCGHAMSKKILRAGYYWI
TMHGDCYNHAKRCHKCQIYADKLPMDIISY
NT seq
5673 nt
NT seq
+upstream
nt +downstream
nt
atgttagcggcagaacaagaaaacgctcagctcagagaggaactggttaacctcaaggga
gagatggaaagaatggcacttatgatggaaactatgatggctgagagagagcaagcagca
atctccaattcaactcctgttgtggtcgtcacagctgcacctgagggtcccccgcaacca
tctccgactattactacaactatcggcctcactcagcctctgaggactgatttttcttct
ggtaatttggcaactatgggtaactcaggcttccgtcctcttggcccccagggtcccttt
gctactcctcagtattccatgccttcaggctacccttggggcatgccgattgcaactaac
gggggttttggtccaggtgctactgaaatgccattcacacagggtcaacagacttcggca
catttccagatgagtcaaccgattccgcaagctaccatgactcaagcaggtcctactgtg
catgttgggccacaacatgaagagcagatttatcactccgacagtataatgggggatgat
aaagcaatcgattgggaagaaaggttcggtgctctagagaagaagatgagtaatatgcgg
gggaaggaaacagtcgtccaaagcatatatgacctttgcttagtaccagatgtaaacata
cctccaaagttcaagatgcctgtatttgagaagtatcaaggggacacgtgtccacaaaat
catctaactatgtatattaggaagatgatagcttacaagaataatgttcccttactcatt
cactgcttccaggatagtttgactggtccggcacatacctggttcatggggttgaaagga
gtcactacttttgaacagttggctgaggccttcatgcaacagtacaaatataatacctat
ctggcgccaagtcgcaaagagttgcagtccttaacccagaaagataaagaatcgttcaaa
gaatacgcacaacgcttcattcaaaaagctgctcagattcgtcctcccttagatgagagg
gaactttcagaattgttctatgaaaccctgagcccttgttattcagaaaagatgattgtc
tgtgcatcacagaagttcactgacttggtggaaacaggaatgcgtatcgaggagtgggct
cgtaagggagcagctgtttcgggaagttcttcaggtggttctttaggggttccgtccaat
ggtaataagaaatttgggaatggttacccaaagaggaatgctcaagaggttggcatggtg
gctcatggaggacctcagcccgtgtacccaaatcacccctttgttgccaacatcacccca
caaatgaccgcaccccagaacccaaactatcaatcacccagacctcaaggacctgcacca
tactaccccccattataccaaccactatacaacctacaacaattccctcaacaaccatat
tacccccaacaaccataccaacaaccccgtcctcaggctcctcacaatcagcagaatcaa
aggcaacaatttgaccccttgccaatgacctatggagcattgctcccttctttacttgca
cagaatctggtccaaacaataccacctcctcgcattccagaccctctcccacgctggtac
cgtccggaccttcattgtatttaccatcaaggggcaccaggccatgatgtggagcgttgt
tttgctcttaagaaagaggttcagaaactgataagtagcaaagagttaaccttcaccgac
cctgatgctgtagctcagaacaatcctctgcctactcatgggcctgctgttaatatgatt
caagacgatcaggaagaggctcgcattctctctgtaggtgatatcaagactcctctggta
ccgatacatgtgaaaatgtgtaaagcaactctcttcaaccacaatcatgaagcttgtgat
atatgtttgatggatcctcgtggatgtatacaagtccagaatgatgtgcagggtctccta
attagaagggaacttgtggttacaagggaacccgagagcaaggacgtctgtgttgtcact
ccggtattcagagccaggaggccgctggtgataaaccccaacagtacaaagcccgttggt
actcccttggtaatctgtgtgcctaggcccacgcctactactgctcagaaagctgtaccc
tacaagtatgaaggcacgattctagagcccggaagtgagacaacttcacctgttgctgtg
gataatatcgcagagaatagccggattttgaggagtggccgcatccttcctacggtgggt
ccgaagagtgttagtgttccggtcgatgagccagtaaaagagcgaaacgccggtaaaggt
aaagctggggagcaggccaaagagtttgactttgaggatgccgatgaagtcttgaagctg
atcaagaagagtgaatacagggtggtggaccagctgttacaaactcctgcgaagatttcc
atcatggccctgttgtcaagttctggtgctcatcgggatgccctgaagaaagtactagac
caggcatttgtggattatgatgtaactctgggtcaattcgaaagcattgtggggaatgtg
accgcgtgtaacggtctgactttcagtgatgaagatctcccggcggaggggaataagcat
aatcaggcattactcatctctgtactttgcagaacggactcgttatccaacgtcctgata
gataccggctctgcacttaatgtgatgcccaagtcaactctcgaccaattggcgtactcc
gaggctcctttgagacttagcaaggtgacggtgagggccttcgatggaactaggagatcg
gtgtatggtgaggtagatttgccaatttcggtcggcccacatgaatttcaggttactttc
caagtcatggaaatccaggcttctttcagctgtttgctcggcagaccatggattcatgac
gccggggcagtgacatctactctccatcagaaattgaagtttgtaagtcgtggaaagttg
atcactgtgagtggcgaatcggcttttttaatcagcaatttgtctgctttctctgttatc
ggtggtagtagttcagacgggccatcattccaagggttctctgccgaagaaagtgtcggt
aagattgagacttgtatggcttcgttgaaggatgcccgaagagtaattcaggaaggcaaa
accgaaggctggggtcagctagtggagttgccagaaaacaagcgtaaagagggaattggt
ttccttaacagtaagcctgggatgttcgaccccaccagaggttctttccacagtgctggt
ttcattcatgattcgccagagaccaatgcaattttagatgatgcgcctggaggagtgaca
ccggtctttgtgacccctggaggagcttgctgcaactggattgctgttgacattccttct
gtgacaccccgctctaaactgaacataagtgaatccgttgaacacagtgactccatgctt
tctcccaactttgaggtcccggtttacgaggctgtggtagaggaggatgaagagatcccg
aatgagatcaaatggatgttggaacaagaaaggaagacaattcaacctcatcaggaagag
atagaaatcatcaatctggttactgaggaagacaagatagatatcaagattggggcatcg
ttggatgtatctgtcaagaaaagagtaattgagattatcagagaatatgttgatatattc
gcatggtcatgcaaagacatgccgggtctagaccctgatgtcgttgaacacagactgcct
ttgaagcctgagtgtccttcgattgatgcaggtttcctagtcacatcagagtatcctcaa
tggttggccaacatagtgcctgttccaaagaaagatggcaaagtcagaatgtgtgttgat
tatcgagacttgaacaaggctagtccgaaggataattttcctttacctcacattgatgta
ttggttgataacactgctaagtgcaaggttttctccttcatggacggtttctccggctac
aatcagatcaggatggctcctgaggatagagaaaagacgtctttcatcacgccctggggt
gctttctgctatgtggtgatgccatttggtttgataaatgctggggccacttaccaaagg
ggctttattgtcagtcaaaagggtattgaagttgatcccgacaaggtcagagccatcaga
gaaatgcctgttccaaagacagagaagcaagtcagagatcaaggggtgaagtggaatgat
gattgtcagaaggcttttgatcaaatcaaagaatatctgttagaacctccaattcttgtt
cctccagttgacggaagacctttgatcatgtatttaacagtactggaagattccatgggc
tgtgttttgggtcaacaagatgaaaccggaaagaaagagcacgctatctactatttgagt
aagaagttcactgattgtgagtcccgatattctgtacttgagaaaacttgttgtgcttta
acttgggctgccaagcgtctccgtcattatatgattaatcatacaacttggttgatatcc
aagatggatcctatcaagtacatatttgagaagccagctttaactggaagaattgctcgc
tggcagatgttattgtccgagtatgatatcgagtatcgcactcagaaagcaatcaaaggt
agcatcttggcagaacatttggctcatcaaccaatcgaagactatcaaccaatcaaattc
gacttcccagatgaagaggttatgtatctaaaagcaaaagattgtgacgaaccggtgttc
ggtgaaggtcctgatcctgaatccggatggggtttgatatttgatggagctgttaatgtc
tatggaagtggaattggtgcggtactcattacccctaagggtactcacatcccttttact
gcgaggttacgttttgattgcacaaacaacattgcagagtacgaagcttgcatcatgggt
atcgaggaagccatcgacttgaggatcaagaaaattgtcatttatggagattccgctctt
gtgattaaccagatcaaaggagaatgggaaactcgtcatcctggattgattccctacaga
gattatgcaaggcgtttgctgactttcttcaacaaagtagagttacatcatgtgccccgc
gatgagaatcaaatggcagatgctttagctactctatcctcaatgatcaatgtgaatggt
cacaatactgtgccagtaatcaatgttcaatttctcgaccgacctgcttatgtgtttgta
gccgaagcaattgatgatgacaagccatggtatcatgatatccaagttttccttcaaact
caaaaatacccacctggggcatccaacaaggacaagaaaacattgagaaaattgtcaagc
cgtttcttccttaacgaagacgttttgtataaaaggaactttgatggggtcctacttaga
tgtgtggataagcatgaagcagaaaaattgatgcgcgagattcatgaaggctcttttgga
actcactcatgcggtcacgccatgtcgaagaagatattgagggctgggtactactggata
acaatgcacggcgattgctacaatcacgccaagagatgccataagtgtcaaatatatgct
gacaagcttccaatggacatcatttcatattag
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integrated database retrieval system
