Medicago truncatula (barrel medic): 120578274
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Entry
120578274 CDS
T01716
Name
(RefSeq) uncharacterized protein LOC120578274
Organism
mtr
Medicago truncatula (barrel medic)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Retrotrans_gag
RVT_1
Asp_protease_2
gag-asp_proteas
Ty3_capsid
DMPK_coil
Motif
Other DBs
NCBI-GeneID:
120578274
NCBI-ProteinID:
XP_039686840
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Position
1:complement(32927505..32931951)
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AA seq
1386 aa
AA seq
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MVATEQENNDLREEVSSLKESMEKITAMMMDMMAAQAQASQAKVVQTVRADVEVSQPAGS
PVTQPISTATIGTTQPLVNQFSSGDMTNMYNSGFRPAGSLGFSIPPQYHMPPGYPWGMPL
ANNEGVRHNAPEMQFPFGQQQTLFYQSGQPFPQATMTCAGPLVHAAHQEEDQVYHSNSVA
GADRVGNLEEKFEAVHKELKTIRGKEMFSQNVNDLYLVPDVVIPHKFKMPIFEKYTGDTC
PEMHLVTYVRKMIAHKNNEPLLIHCFQDSLTGPAHTWYMNLKGIATFEELANAFIKQYKY
NSYLASNQKELQSMTQSDKESFKEYAQRFIQKSAQIRPPLDEREVSDLFYETLSPFYSEK
MLGCASQKFTDMVDMGVRIEDWVRKGRVSKDGASSGGSSNGNRKFGNGYSKKNAQEVGMV
AHGGSQPVYPSYPYVANIPPPTPAPQNPNYQLQRPQTPHPYYPPLYQPQPYQPQPFYQQP
YYTPSPQPQQSRPRAQQQQPHPQRNQFPPIPMTYEALLPSLLVRGLVQTLPPPRVQNPLP
PWFRADRNCAFHQGAPGHDIEHCYPLKEAVQKLIHNKDLSFTDPNPVAPNNPLPPHGPTV
NMVEDYQERGLVTCSQDIKTPLVPLHVKMCEAAMFSHNHNSCEVCSVDPRGCVQVQNDVQ
GLMDRGELVVTREDKSICVVIPVFKDSAKPIDGVTPVFKDNSKPAVTPLVICVPRPKPFF
SQNAMPYNYEPTSIENGKEISWSPSTSVSNIAENSQILRSGRILPAVVQAKKKALVIESV
PIPDPSKGKSVVQPSETDNDEILKIIKKSDYKIVDQLLQTPSKISIMSLLTSSDAHRDAL
MKVLNQAYVDHDVTLGQFGSIVGNVTACNNLSFSDEDLPVEGKNHNMALHISVMCKTDSL
SNVLIDTGSSLNVMAKTTFDKLTYSDGFIRPSCVSVRAFDGSRKTVWGEVDLPITIGPQE
FKVTFQIMDIQASYSCLLGRPWIHEAGAVTSTLHQKLKFVSRGKLVTVSGESALLVSHLS
SFSFIGGENSDGTSFQGLSVENSTTRGETCMASLKDAQRVIQEGKAEGWGKLVQLPENKR
KEGLGFSGNKQVMFDPTRGTFHSAGFINAPPETNAILEDQSEEVAPNFVTPGGNCCNWIV
VDIPYAIPLSKLNIHEPIEHGDPMLPPNFEFLVYEAWVEEDEEIPDELRWMLEQERKVIQ
PHKEEIELINLGTEDDKKEIKIGASLEASVKKKIIELLREYDDIFAWSYKDMLGLDHDVV
EHRLPLKPECPPVKQKLRRSHPDMALKIKEEVRKQIDAGFLITSEYPQWLANIVPVPKKD
GKVRMCVDYRDLNKASPKDDFPLPHIDVLVDSTARCKVFSFMDGFSGYNQIKMAPEDKEK
TSFITP
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atggtagctactgagcaagagaacaatgaccttagggaagaggttagtagcctcaaggaa
agtatggagaagataactgcaatgatgatggacatgatggccgcacaggcacaagcctct
caagcaaaagttgttcagactgttcgggcagatgttgaagtctctcagcctgctggttct
ccggtgacccagccaatttctacagcaactattggtactacacagccgttggtgaatcag
ttttcctcaggtgatatgacaaacatgtataattcagggtttcgtcctgctggctctctt
ggtttttctatccctcctcagtatcatatgccgccaggctatccgtggggcatgccactc
gcaaataatgaaggtgttcgtcataatgcaccagaaatgcagttcccttttggtcagcaa
caaacactgttttatcagtccggccagccttttcctcaggccactatgacctgtgctgga
cccctcgttcatgctgctcatcaagaagaagatcaagtttatcactccaatagtgtggcg
ggtgctgatagggtgggaaacttggaagaaaagtttgaggcggtgcataaagagttaaag
actatccgcggtaaagaaatgttcagtcagaatgtgaatgacctctacttggttccagac
gtggtgatacctcataagtttaaaatgccgatctttgaaaagtacacaggggatacttgc
cctgagatgcacttagtcacatatgtcaggaagatgatagctcacaagaataatgagcct
ctgcttattcactgtttccaggacagtttgactggtcccgcacatacatggtacatgaat
ttgaagggcatcgctacatttgaagagttggccaatgctttcatcaaacagtacaaatat
aactcttatctggcatctaaccagaaagaactgcaatctatgactcagagtgataaggaa
tctttcaaggaatatgctcagcgcttcattcagaaatctgctcaaatccgtccgcctctg
gatgaaagggaagtgtccgatctattctatgagactctgagccctttctactcagagaag
atgcttggttgtgcttcacaaaagtttaccgatatggtagatatgggtgtgcgcattgaa
gattgggtccgtaagggacgtgtgagtaaggatggtgcttcttcaggtggttcatctaat
ggtaataggaagttcggaaatgggtactcaaagaagaacgctcaagaggttggcatggtg
gcccatggcggatcccagcctgtataccccagctacccctatgttgctaacattccacca
cctaccccagctccacaaaatccaaactatcaactacaaaggcctcaaacaccccatcca
tattatccaccactatatcaaccacaaccttatcagccacaaccattttatcagcaacca
tactataccccatcaccacagccacaacagtctcgccctcgagctcaacaacaacagcct
caccctcaaagaaaccaatttccccctattcccatgacatatgaagccttgttaccttcg
ttgcttgtcagaggtcttgttcagaccctaccacctcctcgtgtgcagaaccctttaccc
ccatggttccgtgctgatagaaattgtgcctttcatcaaggggcaccgggacatgacatt
gaacattgttacccccttaaagaagcagttcaaaagttgattcataacaaagatttatcc
tttactgaccctaaccctgttgctccaaacaatcctctgccaccccatgggcctactgtt
aacatggttgaagattatcaagaaagaggtcttgtcacttgctctcaggatatcaaaact
ccgttggttccattacatgtgaaaatgtgtgaggcagctatgtttagccacaatcataat
agttgtgaggtatgttctgtggacccccgcggctgcgtgcaggttcaaaatgatgtgcaa
gggctaatggatcgaggagagctggttgttacaagggaggacaagagcatttgtgttgta
atccctgtgttcaaggatagtgcgaagccaattgacggtgttactccggtgttcaaggac
aattccaagccagctgtcactcctcttgtgatttgtgtgccgagacccaagccgtttttc
tctcaaaacgccatgccgtataattatgaacctacaagcatagagaatggtaaagagata
tcctggagtccctcaacttccgtgagtaacattgcggagaatagtcaaattttgagaagt
ggacgtatccttccggctgttgtgcaagcaaagaagaaagctctggtgatagagtcagtg
ccaataccagatcctagcaagggtaagagtgtggttcaacctagtgaaactgataatgat
gagattttgaagataatcaagaaaagtgattataagatagtggatcagttattgcagact
ccatcaaagatttctatcatgtcactattgacaagctctgatgctcatagggatgcattg
atgaaagtgttgaatcaagcctatgtagaccatgatgtgactttgggtcaatttgggagc
attgttggaaatgtgacggcatgcaacaatctgagtttcagtgatgaagacctcccagtg
gaggggaaaaaccataatatggccttgcatatctctgttatgtgcaaaacagattctttg
tccaatgtcttgatagacaccggttcttccctcaatgtgatggcaaagacaacctttgat
aaattgacatattcagatggatttattaggcctagttgcgtatcagtaagggcatttgat
ggatcccggaaaacggtatggggagaagtagatttacctatcactattggaccccaagag
tttaaagttacattccagataatggatattcaagcttcctacagctgtttacttggtaga
ccgtggattcatgaagccggggcagtaacatccactcttcatcaaaagctaaagtttgtg
agtcgtggaaagcttgttacagtgagtggggaatcagctcttttggttagccatttgtcg
tctttttccttcattggtggtgaaaattcggatggaacgtcattccaagggctttcggtt
gaaaatagtactacaagaggtgaaacatgcatggcctctctaaaggatgctcagagagta
attcaagaaggaaaggctgaaggctgggggaagttagtacagttgcccgagaacaagcgc
aaagaaggtctgggtttctccggcaataagcaagtgatgttcgacccaactaggggtact
tttcacagtgctggattcattaatgcgccacctgagactaatgcaatcttggaagatcaa
tcagaagaggtggcacctaactttgtgactcctggtggaaactgctgcaattggattgtt
gttgacatcccttatgcgatacctctttctaaactgaacatacatgagcccattgaacat
ggtgaccctatgctgcctcccaactttgagttcctagtttacgaggcttgggtagaagag
gatgaagagattcccgatgagctccgatggatgttagagcaagaaagaaaagtcattcag
cctcacaaggaagaaatagagttaatcaacctgggtactgaggatgataaaaaagaaatt
aagattggagcgtcgttggaggcgtctgtcaagaaaaagataattgagcttctcagagag
tatgatgatatatttgcatggtcctacaaagatatgctggggttagaccatgatgttgtg
gaacaccgtttgcctttgaagcccgagtgtcctccagtcaagcagaagttaagaagatct
catccagatatggctctcaagatcaaagaggaagtgcgaaagcaaattgacgcaggtttc
ttgattacctccgaatatcctcaatggttggccaacatagtgcccgttccaaagaaagat
ggtaaggtcagaatgtgtgttgactatcgggatttgaacaaagctagtccgaaagatgat
tttcctttacctcacattgatgtattggttgatagtactgctagatgcaaggtattctcc
ttcatggatggattctccgggtataaccagatcaagatggctccagaagataaagaaaag
acatcgttcatcacgccttag
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