Medicago truncatula (barrel medic): 120579534
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Entry
120579534 CDS
T01716
Name
(RefSeq) uncharacterized protein LOC120579534
Organism
mtr
Medicago truncatula (barrel medic)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
RT_RNaseH
RT_RNaseH_2
RVT_3
RVT_1
Retrotrans_gag
RNase_H
Integrase_H2C2
Asp_protease_2
gag-asp_proteas
Ty3_capsid
rve
rve_3
eIF3h_C
DUF5712
Motif
Other DBs
NCBI-GeneID:
120579534
NCBI-ProteinID:
XP_039687888
LinkDB
All DBs
Position
3:complement(17955737..17968973)
Genome browser
AA seq
2318 aa
AA seq
DB search
MLAAEQENAQLREELVNLKGEMERMALMMETMMAEREQATISNSTPVVVVTAAPEGPPQP
SPTTTTTIGLTQPLMTDFSSGNMATMGNSGFRPLGPQGPFATPQYSIPSGYPWGMPIATN
GGFGPGATEMPFTQGQQTSAHFQMSQLIPQATMTQAGPTVHVGPQHEEQIYHSDSIMGDD
KAIDWEERFGALEKKMSNMRGKETVVQSIYDLCLVPDVNIPPKFKMPVFEKYQGDTCPQN
HLTMYISKMIAYKNNVPLLIHCFQDSLTGPAHTWFMGLKGVTTFEQLAEAFMQQYKYNTY
LAPSRKELQSLTQKDKESFKEYAQRFIQKAAQIRPPLDERELSELFYETLSPCYSEKMIV
CASQKFTDLVETGMRIEEWARKGAAVSGSSSGGSSGVSSNGNKKFGNGYPKRNAQEVGMV
AHGGPQPVYPNHPFVANITPQMTAPQNPNYQSPRPQGPAPYYPPLYQQPYNPQQLSQPPY
YPQQPYYPQQPYQQRPYNPPQQQPRPQVPYNQQNQKQQFDPLPMTYGALLPSLLAQNLVQ
TIPPPRIPDPLPRWYRPDLHCIYHQGAPGHDVERCFALKKEVQKLINSKELTFTDPDAVA
QNNPLPAHGPAVNMIQDDQEEARILSVGDIKTPLVPIHVKMCKATLFNHNHEACDICLMD
PRGCIQVQNDMQGLLNRRELVVTREPESKDVCVVTPVFRARRPLVINPNSTKPVGTPLVI
CVPRPTPTTAQKVVPYKYEGTILEPGSETTSPVAVDNIAENSRILRSGRIFPTVGPKSVS
VPVDEPVKERNAGKGKIGEQAKEFDFDDADEVLKLIKKSEYRVVDQLFQTPAKISIMALL
SSSGAHRDALRKVLDQAFVDYDVTLGQFESIVGNVTACNSLTFSDEDLPAEGNKHNRALL
ISVLCRTDSLSNVLIDTGSALNVMPKSTLDQLAYSEAPLRLSKVTVRAFDGTRRSVYGEV
DLPISVGPHEFQVTFQVMKIQASFSCLLGRPWIHDAGAVTSTLHQKLKFVSRGKLITVSG
ESAFLISNLSAFSVIGGNGSDGPSFQGFSAEESVGRIETCMASLKDARRVIQEGKTEGWG
QLVELPENKRKEGIGFLNSKPGMFDPTRGSFHSAGFIHDSPETNAILDDAPGGVTPVFVT
PGGACCNWIAVDIPSVTPRSKLNISESVEHSDPMLSPNFEVPVYEAVAEEDEEIPNEIKW
MLEQERKTIQPHQEEIEIINLGTEEDKKEIKIGASLDVSVKKRVIELIREYVDIFAWSYK
DMPGLDPDVVEHKLPLKPECPPIDAGFLVTSEYPQWLANIVPVPKKDDKVRMCVDYRDLN
KASPKDNFPLPHIDVLVDNTAKCKVFSFMDGFSGYNQIRMAPEDREKTSFITPWGAFCYV
VMPFGLINAGATYQRGFIVSQKGIEVDPDKVRAIREMPVPKTEKQVRGFLGRLNYISRFI
SHMTATCGPIFKLLRKDQGVKWNDDCQKAFDQIKEYLLEPPILVPPVDGRPLIMYLTVLE
DSMGCVLGQQDETGKKEHAIYYLSKKFTDCESRYSVLEKTCCALTWAAKRLRHYMINHTT
WLISKMDPIKYIFEKPALTGRIARWQMLLSEYDIEYRTQKAVKGSILAEHLAHQPIEDYQ
PIKFDFPDEEVMYLKAKDCDEPVFGEGPDPESEWGLIFDGAVNVYGSGIGAVLITPKGTH
IPFTARLRFDCTNNIAEYEACIMGIEEAIDLRIKKIVIYGDSALVINQIKGEWETRHPGL
IPYRDYARRLLTFFNKVELHHVPRDENQMADALATLSSMINVNGHNTVPVINVQFLDRPA
YVFVAEAIDDDKPWYHDIQVFLQTQKYPPGASNKDKKTLRKLSSRFFLNEDVLYKRNFDG
VLLRCVDKHEAEKLMCEIHEGSFGTHSCGHAMAKKILRAGYYWITMHADCYNHAKRCHKC
QIYADKIHIPPSMLNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKIITDNG
TNLNNNMMKELCDDFKIQHHNSSPYRPQMNGAVEAANKNIKKIIQKMVVTYKDWHEMLPY
ALYGYRTSVRTSTGATPFSLVYGMEAVLPVEVEIPSLRVLMEAELSEAEWCQSRMKQAFD
KGVHPREFKEGDLVLKCIKSFQPDPRGKWTPNYEGPYVVKRAFSGDLCLGDNELKNMCLI
EIEMLLQENGRSLTDFKSMPMANAADMPTFTNKLIVDELNYNKDKREKTHADMLLMLADE
QRCVHDKIMESVDFDDDGFFFIYGYSGTGKIFIWKTLSVAVRSKRLIVLNVASSDITTLL
LPGGKTAHSTLPVPIEINEASSLTMEKDSPRADLVRVV
NT seq
6957 nt
NT seq
+upstream
nt +downstream
nt
atgttagcggcagaacaggaaaacgctcagctcagagaggaactggttaacctcaagggg
gagatggaaagaatggcacttatgatggaaactatgatggctgagagagagcaagcaaca
atctccaattcaactcctgttgtggtcgtcacagctgcacctgagggtcccccgcaacca
tctccgactactactacaactatcggcctcacccagcctctgatgactgatttttcttct
ggtaatatggcaactatgggcaactcaggcttccgtcctcttggcccccagggtcccttt
gctactcctcagtattccataccttcaggctacccttggggcatgccgattgcaactaac
gggggttttggtccaggcgctactgaaatgcctttcacacagggtcaacagacttcggca
catttccagatgagtcaactgattcctcaagctaccatgactcaagcaggtcctactgtg
catgttgggccacaacatgaagaacagatttatcactccgacagtataatgggggatgat
aaagcaatcgattgggaagaaaggttcggtgctctagagaagaagatgagtaatatgcgg
ggaaaggaaacagtcgtccaaagcatatatgacctttgcttggtaccagatgtaaacata
cctccaaagttcaagatgcctgtatttgagaagtatcaaggggacacatgtccacaaaat
catctaactatgtatattagcaagatgatagcttacaagaataatgttcccttactcatt
cactgcttccaggatagtttgactggtccggcacatacctggttcatgggattgaaagga
gtcactacttttgaacagttggctgaggccttcatgcaacagtacaaatataatacctat
ctggcgccaagtcgcaaagagttgcagtccttaacccagaaagataaagaatcgttcaaa
gaatacgcacaacgcttcattcaaaaagctgctcagattcgtcctcccttggatgagagg
gaactttcagaattgttctatgaaaccctgagcccttgttattcagaaaagatgattgtc
tgtgcatcacagaagttcactgacttggtggaaacaggaatgcgtatcgaggagtgggct
cgtaagggagcagctgtttcgggaagttcttcaggtggttcttcaggagtttcgtccaat
ggtaataagaaatttgggaatggttacccaaagaggaatgctcaagaggttggcatggtg
gctcatggaggacctcagcccgtgtaccctaatcacccctttgttgccaacatcacccca
caaatgaccgcaccccagaacccaaactatcaatcacccagacctcaaggacctgcacca
tactatcccccactatatcaacaaccatataacccacaacaactctctcaaccaccctac
tatcctcaacaaccctactatcctcaacaaccataccaacaaaggccatataacccccca
caacaacaaccccgtcctcaagttccctacaaccagcaaaatcaaaaacaacaatttgac
cccttgccaatgacctatggagcattgctcccttctttacttgcacagaatctggtccaa
acaataccacctcctcgcattccggaccctctcccacgctggtaccgtccggaccttcat
tgtatttaccatcaaggggcaccaggccacgatgtggagcgttgttttgctcttaagaaa
gaggttcagaaactgataaatagtaaagagttaaccttcaccgatcctgatgctgtagct
cagaacaatcctctgcctgctcatgggcctgccgttaatatgattcaagacgatcaggaa
gaggctcgcattctctctgtaggtgatatcaagactcctctggtaccgatacatgtgaaa
atgtgtaaagcaactctcttcaaccacaatcatgaagcttgtgacatatgtttgatggat
cctcgtggatgtatacaagtccagaatgatatgcagggtctcctaaatagaagggaactt
gtggttacaagggaacccgagagcaaggacgtctgtgttgtcactccggtattcagagcc
aggaggccgctggtgataaaccctaacagtacaaagcccgttggtactcccttggtaatc
tgtgtgcctaggcccacgcctactactgctcagaaagttgtaccctacaagtatgaaggc
acgattcttgagcccggaagtgagacaacttcacctgttgctgtggataatatcgcagag
aatagccggattttgaggagtggccgcatctttcctacggtgggtccgaagagtgttagt
gttccggtcgatgagccagtaaaagagcgaaacgccggtaaaggtaaaattggggagcag
gccaaagagtttgactttgatgatgccgatgaagtcttgaagctgatcaagaagagtgaa
tacagggtggtggaccagctgtttcaaactcctgcgaagatttccatcatggccctgtta
tcaagttctggtgctcatcgggatgccctgaggaaagtactagaccaggcatttgtggat
tatgatgtaactctgggtcaattcgaaagcattgtggggaatgtgaccgcgtgtaacagt
ctgactttcagtgatgaagacctcccggcggaggggaataagcataatcgagcattactc
atctctgtactttgcagaacggactcgttatccaacgtcttgatagataccggctctgca
cttaatgtgatgcccaagtcaactctcgaccaattggcgtactccgaggctcctttgaga
cttagcaaggtgacggtgagggccttcgatggaactaggagatcggtgtatggtgaggta
gatttgccaatttcggtcggcccacatgaatttcaggttactttccaagtcatgaaaatc
caggcttctttcagctgtttgctcggcagaccttggattcatgacgctggggctgtgaca
tctactctccatcagaaattgaagtttgtaagtcgtggaaagttgatcactgtgagtggc
gaatcggcctttttaatcagcaatttgtctgctttctctgttatcggtggtaatggttca
gacgggccatcattccaaggattctctgccgaagaaagtgtcggtaggattgagacttgt
atggcttcgttgaaggatgcccggagagtaattcaggaaggcaaaaccgaaggctggggt
cagctagtggagttgccagaaaacaagcgtaaggagggaattggtttccttaacagtaag
cctgggatgttcgaccctaccagaggttctttccacagtgctggtttcattcatgattca
ccagagaccaatgcaattttagatgatgcacctggaggagtgacaccggtctttgtgacg
cctggaggagcttgctgcaactggattgctgttgacattccttctgtgacgccccgctct
aaactgaacataagtgaatccgttgaacacagtgaccccatgctttctcccaactttgag
gtcccggtttacgaggctgtggcagaggaggatgaagagatcccgaatgagatcaaatgg
atgttggaacaagaaaggaagacaattcaacctcatcaggaagagatagaaatcatcaat
ctgggtactgaggaagacaagaaagaaatcaagattggggcatcgttggatgtatctgtc
aagaaaagagtaattgagcttatcagagaatatgttgatatattcgcatggtcatacaaa
gacatgccgggtctagaccctgatgtcgttgaacacaaactacctttgaagcctgagtgt
cctccgattgatgcaggtttcctagtcacatcagagtatcctcaatggttggccaacata
gtgcctgttccaaagaaagatgacaaagtcagaatgtgtgttgattatcgggacttgaac
aaggctagtccgaaggataattttcctttgcctcacattgatgtattggttgataacact
gctaagtgcaaggttttctccttcatggacggtttctccggctacaatcagatcaggatg
gctcctgaggatagagaaaagacgtctttcatcacgccctggggtgctttctgctatgtg
gtgatgccatttggtttgataaatgctggtgccacttaccagagaggctttatcgtcagt
caaaagggtattgaagttgatcccgacaaggtcagagccatcagagaaatgcctgttcca
aagacagagaagcaagtcagaggttttcttggtagactcaattatatctccagatttatc
tctcacatgaccgccacatgtggaccaattttcaagttactccgcaaggatcaaggggtg
aagtggaatgatgattgtcagaaggcttttgatcaaatcaaagaatatctgttagaacct
ccaattcttgttcctccagttgacggaagacctttgatcatgtatttaacagtactggaa
gattccatgggctgtgttttgggtcaacaagatgaaaccggaaagaaagagcacgctatc
tactatttgagtaagaagttcactgattgtgagtcccgatattctgtacttgagaaaact
tgttgtgctttaacttgggctgccaagcgtctccgtcattatatgattaatcatacaact
tggttgatatccaagatggatcctatcaagtacatatttgagaagccagctttaactgga
aggattgctcgctggcagatgttattgtccgagtatgatatcgagtatcgcactcagaaa
gcagtcaaaggtagcatcttggcagaacatttggctcatcaaccaatcgaagactatcaa
ccaatcaaattcgacttcccagatgaagaggttatgtatctaaaagcaaaagattgtgac
gaaccagtgttcggtgaaggtcctgatcctgaatccgaatggggtttgatttttgatgga
gctgttaatgtctatggaagtggaattggtgcggtactcattacccctaagggtactcac
atcccgtttactgcgaggttacgttttgattgcacaaacaacatcgcagagtacgaggct
tgcatcatgggtatcgaggaagccatcgatttgaggatcaagaaaattgtcatttatgga
gattccgctcttgtgattaaccagatcaaaggagaatgggaaactcgtcatcctggattg
attccctacagagattatgcaaggcgtttgctgactttcttcaacaaagtagagttacat
catgtgccccgcgatgagaatcaaatggcagatgctttagctactctatcctcaatgatc
aatgtgaatggtcacaatactgtgccagtaatcaatgtccaatttctcgaccgacctgct
tatgtgtttgtagctgaagcaattgatgatgacaagccatggtatcatgatatccaagtt
ttccttcaaactcaaaagtacccacctggggcatccaacaaggacaagaaaacattgaga
aaattgtcaagccgtttcttccttaacgaagacgttttgtataaaaggaactttgatggg
gtcctacttagatgtgtggataagcatgaagcagaaaaattgatgtgcgagattcatgaa
ggctctttcggaactcactcatgtgggcacgccatggcgaagaagatattgagagctggg
tactactggataacaatgcacgctgattgctacaatcatgccaagagatgccacaaatgt
caaatctatgctgacaagattcatataccaccatctatgctcaatgtcatctcttccccg
tggcccttctctatgtggggcattgacatgattggtcggattgaaccaaaggcttccaat
gggcatcgcttcatattagtggctatcgattatttcaccaaaatcatcacagacaatggc
acaaatctgaataacaacatgatgaaagagttgtgcgatgacttcaagattcaacatcac
aattcttctccttacagaccacagatgaatggggcagttgaagctgcaaacaagaacatc
aagaagatcatacagaagatggtagttacttataaggactggcatgaaatgttaccctac
gctttgtatggataccgtacctcagtgcgaacctcgacaggggcaacccctttctctttg
gtatatggtatggaggctgtactacctgtagaggttgagattccttctttaagagtcttg
atggaagctgaattgtctgaagctgaatggtgccagagcaggatgaaacaagcattcgat
aaaggagtccatccccgtgaattcaaggaaggagatcttgtgctcaaatgtatcaaatcc
tttcaaccagatcctaggggcaaatggacgccaaactatgaaggtccctacgtggtgaag
agagctttctctggtgatctgtgtctcggtgacaatgaattgaagaacatgtgtttgatt
gaaattgaaatgctgcttcaggaaaatggacggtcgcttactgacttcaaatctatgccc
atggcaaacgcagcagacatgccaacgttcacaaacaagcttatcgttgatgagctaaat
tacaacaaagataaacgggaaaagacacacgctgatatgttactgatgttggctgatgaa
caaagatgtgtgcatgacaagatcatggagtctgttgattttgacgacgatggtttcttt
ttcatatatggttacagtggtactggaaaaatctttatatggaaaacattgtcagttgct
gttagatcgaagaggttaattgtattgaatgttgcatccagcgatataacgactcttcta
ttaccaggtggaaaaaccgcgcactcgacgctaccagtccctattgagattaatgaggca
tcatcacttacgatggaaaaggatagtcctagggcagaccttgtgcgtgttgtgtaa
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integrated database retrieval system
