Medicago truncatula (barrel medic): 120579590
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Entry
120579590 CDS
T01716
Name
(RefSeq) uncharacterized protein LOC120579590
Organism
mtr
Medicago truncatula (barrel medic)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RT_RNaseH
RT_RNaseH_2
RVT_3
RVT_1
Retrotrans_gag
RNase_H
Integrase_H2C2
Asp_protease_2
gag-asp_proteas
Ty3_capsid
rve
rve_3
eIF3h_C
DUF5712
Motif
Other DBs
NCBI-GeneID:
120579590
NCBI-ProteinID:
XP_039687976
LinkDB
All DBs
Position
3:complement(29196130..29202888)
Genome browser
AA seq
2025 aa
AA seq
DB search
MATMGNSGFRPLGPQGPFATPQYSMPSGYPWGMPIATNVVFGPGATEMPFAQGQQTSAHF
QMSQPIPQATMTQAGPTVHVGPQHEEQIYHSDSIMGDDKAIDWEERFGALEKKMSNMRGK
ETVVQSIYDLCLVPDVNIPPKFKMPVFEKYQGDTCPQNHLTMYISKMIAYKNNVPLLIHC
FQDSLTGPAHTWFMGLKGVTTFEQLAEAFMQQYKYNTYLAPSRKELQSLTQKDKESFKEY
AQRFIQKAAQIRPPLDERELSELFYETLSPCYSEKMIVCASQKFTDLVETGMRIEEWARK
GAAVSGSSSGGSSGVSSSGNKKFGNGYPKRNAQEVGMVAHGGPQPVYPNHPFVANITPQM
TAPQNPNYQPPRPQGPSLYYPPLYQQPYNPQQLSQPPYHPQQPYYPQQPYQQRPYNPPQQ
QPRPQAPYNQQNQRQQFDPLPMTYGALLPSLLAQNLVQTIPPPRIPDPLPRWYRPDLHCI
YHQGAPGHDVERCFALKKEVQKLINSKELTFTDPDAVAQNNPLPTHGPAVNMIQDDQEEA
RILSVGDIKTPLVPIHVKMCRATLFNHNHEACDICSMDPRGCIQVQNDVQGLLNRRELVV
TRETESKDVCVVTPVFRARRPLVINPNSTKPVGTPLVICVPRPTPTTAQKAVPYKYEGTV
LEPGSETTSPVAVDNIAENSRILRSGRIFPTVGPKSVSVPVDEPVKERNAGKGKAGEQAK
EFDFEDADEVLKLIKKSEYRVVDQLLQTPAKISIMALLSSSGAHRDALRKVLDQAFVDYD
VTLGQFESIVGNVTICNSLTFSDEDLPAEGNKHNQALFISVLCRTDSLSNVLIDTGSALN
VMPKSTFDQLAYSEAPLRLSKVTVRAFDGTRRSVYGEVDLPISVGPHEFQVTFQVMEIQA
SFSCLLGRPWIHDAGAVTSTLHQKLKFVSRGKLITVSGESAFLISNLSAFSVIGGSGSDG
PSFQGFSAEESVGKIETCMASLKDARRVIQEGKTEGWGQLVELPENKRKEGIGFLNSKPG
MFDPTRGSFHSAGFIHDSPETNAILDDAPRGVTPVFVTPGGACCNWIAVDIPSVTPGSKL
NISESVEHSDPMLSPNFEVPVYEAVAEEDEEIPNEIKWMLEQERKTIQPHQEEIEIINLG
TEEDKKEIKIGASLDVSVKKRVIELIREYVDIFAWSYKDMPGLDPNVVEHRLPLKPECPP
IKEEVRKQIDAGFLVTSEYPQWLANIVPVPKKDGKVRMCVDYRDLNKASPKDNFPLPHID
VLVDNTAKCKVFSFMDGFSGYNQIRMAPEDREKTSFITPWGAFCYVVMPFGLINAGATYQ
RGFIVSQKGIEVDPDKVRAIREMPVPKTEKQVRGFLGRLNYISRFISHMTATCGPIFKLL
RKDQGVKWNDDCQKAFDQIKEYLLEPPILVPPVDGRPLIMYLTVLEDSMGCVLGQQDETG
KKEHAIYYLSKKFTDCESRYSVLEKTCCALTWAAKRLRHYMINHTTWLISKMDPIKYIFE
KPALTGRIARWQMLLSEYDIEYRTQKAVKGSILAEHLAHQPIEDYQPIKFDFPDEEVMYL
KAKDCDEPVFGEGPDPESEWGLIFDGAVNVYGSGIGAVLITPKGTHIPFTARIRFDCTNN
IAEYEACIMGIEEAIDLRIKKIVIYGDSALVINQIKGEWETRHPGLIPYRDYARRLLTFF
NKVELHHVPRDENQMADALATLSSMINVNGHNTVPVINVQFLDRPAYVFVAEAIDDDKPW
YHDIQVFLQTQKYPPGASNKDKKTLRKLSSRFFLNEDVLYKRNFDRVLLRCVDKHEAEKL
MCEIHEGSFGTHSCGHAMAKKILRAGYYWITMHADCYNHAKRCHKCQIYADKIHIPPSML
NVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKIITDNGTNLNNNMMKELCDD
FKIQHHNSSPYRPQMNGAVEAANKNIKKIIQKMVVTYKDWHEMLPYALYGYRTSVRTSTG
ATPFSLVYGMEAVLPVEVEIPSLRVLMEAELSEAEWCQSSYISQG
NT seq
6078 nt
NT seq
+upstream
nt +downstream
nt
atggcaactatgggcaactcaggcttccgtcctcttggcccccagggtccctttgctact
cctcaatattccatgccttcaggctacccttggggcatgccgattgcaactaacgtggtt
tttggtccaggcgctactgaaatgcctttcgcacagggtcaacagacttcggcacatttc
cagatgagtcaaccgattcctcaagctaccatgactcaagcaggtcctactgtgcatgtt
gggccacaacatgaagagcagatttatcactctgacagtataatgggggatgataaagca
atcgattgggaagaaaggttcggtgctctagagaagaagatgagtaatatgcggggaaag
gaaacagtcgtccaaagcatatatgacctttgcttggtaccagatgtaaacatacctcca
aagttcaagatgcctgtatttgagaagtatcaaggggacacgtgtccacaaaatcatcta
actatgtatattagcaagatgatagcttacaagaataatgttcccttactcattcactgc
ttccaggatagtttgactggtccggcacatacttggttcatggggttgaaaggagtcact
acttttgaacagttggctgaggccttcatgcaacagtacaaatataatacctatctggcg
ccaagtcgcaaggagttgcagtccttaacccagaaagataaagaatcgttcaaagaatac
gcacaacgcttcattcaaaaagctgctcagattcgtcctcccttggatgagagggaactt
tcagaattgttctatgaaaccctgagcccttgttattcagaaaagatgattgtctgtgca
tcacagaagttcactgacttggtggaaacaggaatgcgtatcgaggagtgggctcgtaag
ggagcagctgtttcgggaagttcttcaggtggttcttcaggagtttcgtccagtggtaat
aagaaatttgggaatggttacccaaagaggaatgctcaagaggttggcatggtggctcat
ggaggacctcagcccgtgtaccctaatcacccctttgttgccaatatcaccccacaaatg
accgcaccccagaacccaaactatcaaccaccaagacctcaagggccttcattatactat
cccccactatatcaacaaccatataacccacaacaactctctcaaccaccctaccatcct
caacaaccctactatcctcaacaaccataccaacaaaggccatataaccccccacaacaa
caaccccgtcctcaggctccttacaatcagcagaatcaaaggcaacaatttgaccccttg
ccaatgacctatggagcattgctcccttctttacttgcacagaatctggtccaaacaata
ccacctcctcgcattccggaccctctcccacgctggtaccgtccggaccttcattgtatt
taccatcaaggggcaccaggccacgatgtggagcgttgttttgctcttaagaaagaggtt
cagaaactgataaatagtaaagagttaaccttcaccgaccctgatgctgtagctcagaac
aatcctctgcctactcatgggcctgctgttaatatgattcaagacgatcaggaagaggct
cgcattctctctgtaggtgatatcaagactcctctggtaccaatacatgtgaaaatgtgt
agagcaactctcttcaaccacaatcatgaagcttgtgacatatgttcgatggatcctcgt
ggatgtatacaagtccagaatgatgtgcagggtctcctaaatagaagggaacttgtggtt
acgagggaaaccgagagcaaggacgtctgtgttgtcactccggtattcagagccaggagg
ccgctggtgataaaccctaacagtacaaagcccgttggtactcccttagtaatttgtgtg
cctaggcccacgcctactactgctcagaaagctgtaccctataagtatgaaggcacggtt
cttgagcctggaagtgagacaacttcacctgttgctgtggataatatcgcagagaatagc
cggattttgaggagtggccgcatctttcctacggtgggtccgaagagtgttagtgttccg
gtcgatgagccagtaaaagagcgaaacgccggtaaaggtaaagctggggagcaggccaaa
gagtttgactttgaggatgccgatgaagtcttgaagttgatcaagaagagtgaatacagg
gtggtggaccagctgttacaaactcctgcgaagatttccatcatggccctgttatcaagt
tctggtgctcatcgggatgccctgaggaaagtactagaccaggcatttgtggattatgat
gtaactctgggtcaattcgaaagcattgtggggaatgtgaccatatgtaacagtctgact
ttcagtgatgaagatctcccggcggaggggaataagcataatcaagcattattcatctct
gtactttgcagaacggactcgttatccaacgtcctgatagataccggctctgcacttaat
gtgatgcccaagtcaactttcgaccaattggcatactccgaggctcctttgagacttagc
aaggtgacggtaagggccttcgatggaactaggagatcggtgtatggtgaggtagattta
ccaatttcggtcggcccacatgaatttcaggttactttccaagtcatggaaatccaggct
tctttcagctgtttgctcggcagaccatggattcatgacgctggggctgtgacatctact
ctccatcagaaattgaagtttgtaagtcgtggaaagttgatcactgtgagtggcgaatcg
gcctttttaatcagcaatttgtctgctttctctgttatcggtggtagtggttcagacggg
ccatcattccaagggttctctgccgaagaaagtgtcggtaagattgagacttgtatggct
tcgttgaaggatgcccggagagtaattcaggaaggcaaaaccgaaggctggggtcagcta
gtggagttgccagaaaacaagcgtaaggagggaattggtttccttaacagtaagcctggg
atgttcgaccctaccagaggttctttccacagtgctggtttcattcatgattcaccagag
accaatgcaattttagatgatgcacctagaggagtgacaccggtctttgtgacgcctgga
ggagcttgctgcaactggattgctgttgacattccttctgtgacacccggctctaaactg
aacataagtgaatccgttgaacacagtgaccccatgctttctcccaactttgaggtcccg
gtttacgaggctgtggcagaggaggatgaggagatcccgaatgagatcaaatggatgttg
gaacaagaaaggaagacaattcaacctcatcaggaggagatagaaatcatcaatctgggt
actgaggaagacaagaaagaaatcaagattggggcatcgttggatgtatctgtcaagaaa
agagtaattgagcttatcagagaatatgttgatatattcgcatggtcatacaaagacatg
ccgggtctagaccctaatgtcgttgaacacagactaccgttgaagcctgagtgtcctccg
atcaaagaggaagtgcgaaagcaaattgatgcaggtttcctagtcacatcagagtatcct
caatggttggccaacatagtgcctgttccaaagaaagatggtaaagtcagaatgtgtgtt
gattatcgggacttgaacaaggctagtccgaaggataattttcctttgcctcacattgat
gtattggttgataacactgctaagtgcaaggttttctccttcatggacggtttctccggc
tacaatcagatcaggatggctcctgaggatagagaaaagacgtctttcatcacgccctgg
ggtgctttctgttatgtggtgatgccatttggtttgataaatgctggtgccacttaccag
aggggctttatcgtcagtcaaaagggtattgaagttgatcccgacaaggtcagagccatc
agagaaatgcctgttccaaagacagagaagcaagtaagaggttttcttggtagactcaat
tatatctccagatttatctctcacatgaccgccacatgtggaccaattttcaagttactc
cgcaaggatcaaggggtgaagtggaatgatgattgtcagaaggcttttgatcaaatcaaa
gaatatctgttagaacctccaattcttgttcctccagttgacggaagacctttgatcatg
tatttaacagtactagaagattccatgggctgtgttttgggtcaacaagacgaaaccgga
aagaaagagcacgctatctactatttgagtaagaagttcactgattgtgagtcccgatat
tctgtacttgagaaaacttgttgtgctttaacttgggctgccaagcgtctccgtcattat
atgattaatcatacaacttggttgatatccaagatggatcctatcaagtacatatttgag
aagccagctttaactggaaggattgctcgctggcagatgttattgtccgagtatgatatc
gagtatcgcactcagaaagcagtcaaaggtagcatcttggcagaacatttggctcatcaa
ccaatcgaagactatcaaccgatcaaatttgacttcccagatgaagaggttatgtatcta
aaagcaaaagattgtgacgaaccagtgttcggtgaaggtcctgatcctgaatccgaatgg
ggtttgatatttgatggagccgttaatgtctatggtagtggaattggtgcagttctcatt
acccctaagggtactcacatcccttttactgcaaggattcgatttgattgtacaaacaac
atcgcagaatatgaagcttgcatcatgggtatcgaagaagccatcgacttgaggatcaag
aaaattgtcatctatggagattccgctcttgtgattaaccagatcaaaggagaatgggaa
actcgccatcctggtttgattccctacagagattatgcgagacgattgctgactttcttc
aacaaagtagagttacaccatgtgccccgtgatgagaatcaaatggcggatgctttagct
actctatcctcaatgatcaatgtgaatggtcacaatactgtgccagtaatcaatgtccaa
tttctcgaccgacctgcttatgtgtttgtagctgaagcaattgatgatgacaagccatgg
tatcatgatatccaagttttccttcaaactcaaaagtacccacctggggcatccaacaag
gacaagaaaacattgagaaaattgtcaagccgtttcttccttaacgaagacgttttgtat
aaaaggaactttgatagggtcctacttagatgtgtggataagcatgaagcagaaaaattg
atgtgcgagattcatgaaggctctttcggaactcactcatgtgggcacgccatggcgaag
aagatattgagagctgggtactactggataacaatgcacgctgattgctacaatcatgcc
aagagatgccacaaatgtcaaatctatgctgacaagattcatataccaccatctatgctc
aatgtcatctcttccccgtggcccttctctatgtggggcattgacatgattggtcggatt
gaaccaaaggcttccaatgggcatcgcttcatattagtggctatcgattatttcaccaaa
atcatcacagataatggcacaaatctgaataacaacatgatgaaagagttgtgcgatgac
ttcaagattcaacatcacaattcttctccttacagaccacagatgaatggggcagttgaa
gctgcaaacaagaacatcaagaagatcatacagaagatggtagttacttataaggactgg
catgaaatgttaccctacgctttgtatggataccgtacctcagtgcgaacctcgacaggg
gcaacccctttctctttggtatatggtatggaggctgtactacctgtagaggttgagatt
ccttctttaagagtcttgatggaagctgaattgtctgaagctgaatggtgccagagcagt
tatatcagtcaaggatga
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