Medicago truncatula (barrel medic): 25483846
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Entry
25483846 CDS
T01716
Name
(RefSeq) transcription initiation factor TFIID subunit 12
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
25483846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtr03021
]
25483846
03036 Chromosome and associated proteins [BR:
mtr03036
]
25483846
Transcription machinery [BR:
mtr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
25483846
Coactivators
SAGA/TFTC/STAGA complex
25483846
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
25483846
STAGA complex
25483846
TFTC complex
25483846
SAGA complex
25483846
SLIK complex
25483846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
Histone
CBFD_NFYB_HMF
TFIID-31kDa
SIP1
Motif
Other DBs
NCBI-GeneID:
25483846
NCBI-ProteinID:
XP_013468014
UniProt:
A0A072VK96
LinkDB
All DBs
Position
1:30241214..30249441
Genome browser
AA seq
515 aa
AA seq
DB search
MESQPPATGTTARTTTEPSQSQPQHQPPPSLPPPTSSTPPISAPSHPSPIPNPNPNLIQT
PNPKPPTPLPPQSRPPPSSFSRNPPPTQSHYSHFSSIPPSANPSQASSFPSNPASSISSA
SAPRGGMAIGVPAHHQSPSPPFSSSFSQHFGGMGRSDSTTNSNTSQVRAPMQGMGTLGSF
GSNSQMRPGGMPPHQQRPVQSSLRPPPPSAQNNQPAGSQSFQGHGLMRPSSAGPPSAPSS
SASQGMQSINQPWLSSGPPGKPPLPSPAYRQQINPQSLQQRTHISQQQQSMPTASQQQQP
LPSNQTQEHFGQQVPSSRAPHVPHQAQVTRLQGPGNQKPSSLVAGQSGAVQPGSQSRLPN
TLPNADIEESGKSVLSKRSIHELVHQVDPLEKLDPEVADILGDIAENFLESIIRSGCSLA
KHRKSTTLEAKDVLLHLEKNWNITLPGFGGDEIKNYRKPLSTDIHKERLAAIKKSMIATE
AAHPKGSAGQASGSAKGSQAKIPFNVLGSPNLKNP
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgcaacctccggccaccggaaccaccgctagaaccaccaccgaaccctcacaa
tctcaaccacaacaccaaccaccaccctctctccctccacccacctcctcaacccctccc
atctcagcaccatcacatccttccccaatccctaaccctaaccctaacctaatccaaact
ccaaatcctaaacccccaactccacttcctccccaatcacgtcctcctccgtcttcattc
agccgaaatcctcctccgacacagtcacattactctcacttctcatcaatcccaccttcc
gctaatccttcacaggcttcatcttttccgtccaatcccgcttcgtcgatttcctcggct
tccgcgccgagaggcggtatggcaatcggtgtacctgcccaccaccagagcccttcgcct
ccgttttcttcttcttttagtcagcattttggtggaatgggtcgttctgattctaccaca
aattctaacacctctcaggtgagagcgccaatgcaaggaatggggactttaggatctttc
ggttcaaattcacaaatgcggccaggtggaatgcctccgcatcaacagagaccggttcaa
tcgtctctcagaccaccgccaccgtctgctcaaaataatcaacctgctggttcacagagt
ttccaaggtcatggactaatgagaccgtcatctgcgggaccaccttccgctccatcttca
agtgcatcacaaggtatgcagtcaattaatcagccatggttgtcgtctgggccgccaggg
aagcctcctttgccatccccagcttataggcagcaaataaacccacaatccttgcagcaa
aggacacatatttcccagcagcagcaatccatgccaacagcttcacagcagcagcaacct
ttgccttctaatcaaacccaggagcattttgggcaacaagttccgtcttcaagggctcct
catgtgcctcaccaggcgcaggttacaaggctacaggggccaggaaatcagaaaccttca
tcacttgtggctggacagtccggtgcagttcaaccagggagtcaaagtagattaccaaat
actttaccaaatgcagatatagaagaatcgggcaagagtgttctcagcaaaagaagcatc
catgagctagtccatcaggttgatccattggagaagttagatcctgaagttgcagacatt
cttggcgatattgcagaaaattttctggagtctataattaggtcaggttgctcactagcc
aagcatcggaagtcaacaactttggaagccaaggacgtacttttacatcttgagaaaaat
tggaatattacgcttcctggatttggtggtgatgagattaaaaactacagaaaaccgctt
tcaactgatattcacaaagagcgcctagcggctataaagaaatcaatgatagcaactgag
gctgcacatcctaagggctctgctggtcaggcttctggcagtgcaaagggtagtcaggca
aagatacctttcaatgtccttggctctcccaaccttaaaaatccataa
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