Medicago truncatula (barrel medic): 25486891
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Entry
25486891 CDS
T01716
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 4
KO
K18999
RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:
3.1.3.16
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mtr01009
]
25486891
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtr03021
]
25486891
Enzymes [BR:
mtr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
25486891
Protein phosphatases and associated proteins [BR:
mtr01009
]
HAD phosphatases
Fcp/Scp phosphatases
25486891
Transcription machinery [BR:
mtr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
25486891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
BRCT
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
25486891
NCBI-ProteinID:
XP_013464173
UniProt:
A0A072V9Y6
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Position
2:32547225..32552069
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AA seq
440 aa
AA seq
DB search
MSDDETEFPDSTDSSGSTDELIEKLEDELDDDGSDNSSSDEEAESQDSRIKRLKSDSTSE
TKASTSAGTAEQKLDGCMHPGSFGGICIHCGQKVDGESGVSFGYIHKGLKLDDKEISRVR
SRDVKNLLNRRKLCLVLDLDHTLLNTTSLHRLSPEEMHLKTHTDSLEDISKGSLFMLEHV
QVMTKLRPFVRTFLKEASEMFEMYIYTMGDRRYSLEMARLLDPQGEYFKDKVISRDDGTQ
KNVKDLDLVLGTENSILILDDKEEVWPKYRDNLILMERYHFFNSSCQDFGLQCKSLAALN
IDENETDGALAKILEVLRQINYKFFDELQGDLVDRDVRQVLSSFRGEVLRGCVIVFSLNF
RGDLRILRRIAERLGATCLKKLDPTVTHVIGTDFVTKESRWAVQEKKFLVNRRWLEAANF
FLQKQPEENFLCQNTLVSGN
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgatgagacagaatttcctgacagtaccgattcatctggcagtactgatgag
ttaattgaaaagcttgaggatgaactagatgatgatggttcagacaactcatcgtcagat
gaagaagctgaaagccaagattccagaattaaaagacttaagtctgatagcaccagtgaa
actaaggcgtctacttcagcaggaaccgcggaacaaaaattagatggatgtatgcatcct
ggatcatttggaggcatttgtatacattgtgggcaaaaggtggatggggaatctggtgtg
tcatttgggtatatacataagggactaaaacttgatgataaggaaatttctagagtgcgc
agcagagacgtgaagaatttattaaatcgtagaaagctttgcttggttctggacttagat
cacacactgctaaataccacttcccttcatcgtttgagcccagaagaaatgcatttaaaa
acccatacagattctctagaagatatctctaaaggtagcctcttcatgttggagcatgtg
caagtaatgaccaagttgaggccctttgtccgcacatttcttaaagaagcaagtgaaatg
tttgaaatgtacatctacaccatgggtgatcggcggtactcgttagagatggccaggctg
cttgatcctcaaggggaatacttcaaagataaggtaatttctcgagatgatgggactcaa
aagaacgtgaaagatctggatcttgtgttggggacagaaaattctatcttaattcttgat
gacaaagaagaggtatggccgaagtacagagataatctgatattgatggagagataccac
tttttcaattcaagttgtcaggacttcggcctccaatgcaaatcacttgctgcattgaat
attgatgagaatgaaactgatggtgcgcttgccaaaatactcgaagtgctaagacagatc
aactacaaattcttcgatgaacttcaaggagatcttgttgatcgagatgtgaggcaggtt
ttgtcatcatttcgaggtgaagtcttaagaggatgtgtgatcgttttcagccttaatttt
cgtggtgacttgcgaatactcaggaggatagcagagaggttaggagctacttgtttgaaa
aaacttgaccccactgtgacacatgtaattggtacagattttgtaactaaggagtcccgg
tgggccgtgcaagagaagaagtttttggttaatcgtcgttggctagaggctgcaaatttc
tttttgcaaaagcagcctgaggagaactttctttgtcaaaatacactagtttctggtaat
tag
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