KEGG   Medicago truncatula (barrel medic): 25490931
Entry
25490931          CDS       T01716                                 
Name
(RefSeq) clathrin heavy chain 1
  KO
K04646  clathrin heavy chain
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    25490931
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mtr04131]
    25490931
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mtr04147]
    25490931
Membrane trafficking [BR:mtr04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Clathrin
    25490931
Exosome [BR:mtr04147]
 Exosomal proteins
  Proteins found in most exosomes
   25490931
SSDB
Motif
Pfam: Clathrin Clathrin_propel Clathrin_H_link Clathrin-link
Other DBs
NCBI-GeneID: 25490931
NCBI-ProteinID: XP_013460296
UniProt: A0A072UXN6
LinkDB
Position
3:29327432..29338799
AA seq 1704 aa
MAANAPITMKEALTLGSVGINPQFITFTHVTMESEKFICVRETGPSNSVVMIDMNMPMQP
LRRPITADSALMNPNTRILALKAQVPGTTQDHLQVFNIETKTKMKSYQMNQQVVFWKWVT
PKTLGIVTQTSVYHWSIEGDGEPVKVFDRTANLANNQIINYRCDPSEKWLVLIGIAPGNP
ERPQLVKGNMQLFAVDQQRSQALEAHAASFASFRVPGNDKDSILICFASKTINAGQVTSK
MHVIELGAQPGKPSFSKKQADLFFPPDFADDFPVSMQISNKYGLIYVITKLGLLFVYDME
TATAVYRNRISPDPIFLTSEASSVGGFYAINRRGQVLLATVNEATIVPFVSGQLNNLELA
VNLAKRGNLPGAEELVVQRFQELFAQTKYKEAAELAAESPRGILRTPDTVAKFQSVPVQA
GQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLVK
TVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYMFLLQTILRTDPQG
AVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGYLQSKVLEI
NLVTFPNVADAILANGMFTHYDRPRIAQLCEKAGLFIRALQHYSELPDIKRVIVNTHAIE
PQSLVEFFGTLSREWALECMKDLLLVNLRGNLQIIVQTAKEYSEQLGADACIKLFEQFKS
YEGLYFFLGSYLSSSEDPEIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEAK
LPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPED
FIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDSN
NNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELVNVTNKNSLFKLQARYV
VERMDADLWDKVLNPENEFRRQLIDQVVSTALPESKSPDQVSAAVKAFMTADLPHELIEL
LEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPSVGEVAVEAQLYEE
AFAIFKKFNLNVPAVNVLLDNLKTIDRAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIES
FIRADDSTHFLEVIKAAEDGDVYHDLVRYLLMVRQKTREPKVDSELIYAYAKIDRLGEIE
EFILMPNVANLPVVGDRLYDDTLYEAAKIIFAFISNWAKLAVTLVKLQQFQGAVDAARKA
NSSKTWKEVCFACVDAEEFRLAQICGLNVIIQVDDLEEVSEFYQNRGCFNELISLMESGL
GLERAHMGIFTELGVLYARYRPEKLMEHIKLFSSRLNIPKVIRACDEQQHWKELTYLYIQ
YDEFDNAATTVMNHSPEAWEHMQFKDIIVKVASVELYYKAVHFYLKEHPEVINDLLNVIA
LRVDHTRVVDIMRKAGHLKLIKPYMVAVQSNNVSAVNEALNEIYVEEEDYDRLRESTDLH
DNFDQIGLAMKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDHLYKDCMETCSQSGDR
ELSEDLLVYFIEKGKKECFASCLFVCYDIIRPDVALELAWMNNMIDFAFPYILQFIREYS
SKVDELIKEKIEAQIEEKAKEKEEKEVIAQQNMYAQLLPLALPAPPMPGMGGGYAPPPPQ
PPMGGMGMPGMPPMPPFGLPPMGY
NT seq 5115 nt   +upstreamnt  +downstreamnt
atggctgctaacgcccccatcaccatgaaagaagccttaacgttgggaagcgttgggatc
aatccacaattcatcacattcacacatgtgacgatggaatctgagaaattcatttgtgtt
cgagaaaccggtccttcgaatagtgttgttatgattgatatgaatatgcctatgcaacct
ttgagacggcctatcactgctgattctgctcttatgaaccccaataccagaattctcgct
cttaaagctcaagttcctggaactactcaggatcatttgcaagtgtttaacattgaaacg
aaaacaaagatgaaatcatatcaaatgaaccaacaggttgtgttttggaagtgggtaacc
ccaaagacgttaggcatagtcactcagacatctgtgtatcattggtcaattgaaggtgat
ggtgagccagtgaaggtgtttgatcgaacagctaatctcgcgaataatcagatcatcaat
tatcgttgtgatcctagtgaaaagtggttggttttgattggaattgctcctggtaatcct
gagagaccacaacttgtaaaaggaaacatgcaactcttcgcagttgatcaacaacgaagt
caggctcttgaagcacatgctgcctcgtttgcctcgtttcgagttcctggaaatgataag
gattcaattcttatttgttttgcatccaagaccattaatgctggacaggttacatcaaag
atgcatgtcattgaacttggtgcccagccaggcaagccatcgttttctaaaaaacaagca
gatctgttctttcctccagactttgctgatgactttcctgtatcaatgcagatttcaaat
aaatacggcttgatatatgtgatcacaaaacttgggcttttatttgtctatgatatggag
actgccactgcagtttacagaaatcgaatcagtcccgatcctatatttttgacctcagaa
gcatcctcggtagggggattttatgccataaatagacgtggccaagtgttgctggctact
gtgaatgaggcaaccattgtaccttttgttagtggccagctaaacaatttggaacttgct
gttaatcttgctaaaagaggaaacctccctggtgcagaagaattggttgttcagcgtttt
caagaattatttgctcagaccaaatataaggaagctgcagagcttgctgcagagtcacca
cgaggaatacttcgtactcctgacacagtagctaaatttcagagtgtacctgtacaagct
ggacaaacaccaccgttgttgcaatactttggaactctgttaaccaggggtaaactcaat
gcttttgagtcgttggaactgtcacgacttgtggtaaatcagaacaagaagaatcttttg
gaaaattggctagcagaggacaaactggaatgcagtgaggagcttggcgaccttgtgaag
acagttgataatgaccttgcactgaaaatctatattaaagctagagctacaccgaaagtt
gttgcagcttttgcggaaaggagggaattcgacaagatcctgatttattccaagcaggtt
ggatatacacctgattacatgttccttctgcaaacaattttacggacagacccgcagggt
gctgtcaattttgctctcatgatgtctcaaatggagggaggttgccccgttgactacaac
acgataacagacctctttctccagaggaacttgatccgcgaggcaacagcatttttgttg
gatgtgctaaagccaaacctacctgaacatggatatcttcaatcaaaggttctggaaatt
aatctagtgacgtttccaaatgttgctgatgctatattggccaatggcatgttcactcat
tatgatcgcccacgcattgctcaactctgtgaaaaggccggccttttcatacgtgctctt
cagcattatagtgagttgcctgatatcaaacgtgtcatcgtgaatacacatgccattgag
ccacagtctttagttgagttctttggaaccctttctcgagaatgggcacttgagtgtatg
aaagatcttttactggtcaatcttaggggaaatcttcagataattgttcagactgctaag
gaatattctgagcagctgggagctgatgcatgcatcaaactctttgagcaatttaaatcc
tatgaaggactatattttttcttgggttcatacttgagctccagtgaggatcctgaaatt
cacttcaagtacattgaagccgctgctaaaactggacaaattaaggaggtagagcgtgtg
actagggaatcaaacttctatgatgctgagaagacaaagaactttttaatggaggctaaa
cttccagatgcacgcccattgattaatgtgtgtgatcgttttggttttgttccagatctc
acacattatctttataccaacaatatgctgcgctatattgagggttatgttcaaaaggtc
aatcctggaaatgctcctctagttgtaggacagctgttagatgatgaatgccccgaagat
ttcattaaaggtctcatactttcagttcgttctcttttgccagttgagcctttagttgaa
gagtgtgagaagaggaatcgtctccgcttgttgactcagttcttggagcatcttgtgagt
gaaggaagccaggatgtacatgtgcacaatgctttgggtaaaatcatcattgacagcaac
aacaatcctgaacatttcctcacaaccaacccatattatgattctcgtgttgttggtaag
tattgtgagaaacgagatcctactcttgctgttgttgcttaccgaagagggcaatgtgat
gatgagcttgttaatgttaccaataaaaattccttgttcaaactccaagcgagatatgtt
gtggaaaggatggatgctgacctctgggacaaagttcttaatcctgagaatgagtttaga
agacagttgattgatcaagtggtttccaccgctttgcctgaaagcaagagtcctgatcaa
gtttcagctgcagtgaaagcttttatgaccgctgatcttccccatgagttaattgagctt
cttgaaaagattgtgctacaaaattctgctttcagcggaaacttcaatctgcaaaatctg
ttgatcctcactgcaataaaggcagatccttcaagagttatggattacataaataggttg
gataactttgatggaccctcagtgggggaggtggcagtggaagcacaactatatgaagaa
gcatttgctattttcaagaaatttaatttgaatgttccggctgttaatgttctgctagat
aaccttaagactattgatcgtgcggtggagtttgctttccgggttgaagaagatgctgtt
tggagccaggtggcgaaggctcaactgagagaaggattagtaagtgatgcaattgagtcg
ttcatccgggcagatgattcaactcatttcttagaggttataaaggctgctgaagatgga
gatgtataccatgacctggtaaggtaccttctcatggttaggcagaagaccagagagccc
aaggtggacagtgaactcatttatgcttatgctaagattgatcggcttggagaaattgaa
gagtttatattgatgccaaatgttgccaatttaccagttgttggagaccgcttgtatgat
gacactctatatgaggctgccaaaattatatttgcttttatctctaactgggctaagtta
gcagtcacattggttaagcttcaacagttccagggtgctgttgatgctgccaggaaagca
aacagttcaaaaacttggaaggaagtttgtttcgcttgtgttgatgctgaggaattccgc
ttagctcaaatttgtggtctcaatgtcatcattcaggtggatgatttggaggaggttagt
gagttttatcagaacaggggatgcttcaatgaactcatatctcttatggagagtgggcta
ggattggagcgggctcatatgggtatcttcactgaattgggagttctttatgcaagatat
cgtcccgagaaactaatggaacacattaagttgttctcaagccggcttaatattccaaag
gttattcgggcatgtgatgaacagcagcactggaaagaacttacatacttgtacatccaa
tatgatgagtttgataatgctgcaaccactgtaatgaatcactctcctgaagcatgggag
cacatgcaattcaaagatattatagttaaagttgcaagtgtggaactctactataaagct
gttcacttctacttgaaagaacatcctgaagtaataaatgatcttctaaatgtgattgct
cttcgtgtggaccatactcgtgtagtagatataatgcgaaaggctggccatctcaaattg
atcaagccatacatggtcgcagtccaaagtaataatgtctctgctgtcaatgaagctcta
aatgaaatttatgttgaggaagaggactatgacagacttcgagaatcaacagatctgcat
gacaactttgatcagataggtcttgcaatgaagattgagaagcatgaacttcttgaaatg
aggcgtgttgctgcatacatctataagaaagcaggaagatggaagcaatccattgctttg
tcaaaaaaggaccatctttacaaggactgtatggaaacttgctctcaatctggtgaccgc
gaactatcagaagatttgcttgtctactttattgagaaggggaagaaagagtgttttgca
tcatgtctctttgtctgctatgatattatacggccagatgttgctcttgagttggcttgg
atgaataacatgattgattttgctttcccatatatcttacaatttatccgagagtattca
agcaaggtagatgagcttatcaaggaaaaaattgaagcacaaattgaggagaaagctaag
gagaaggaggagaaggaagtaattgctcagcagaatatgtatgcccagttgctaccactt
gctttgccagcaccaccaatgccaggaatgggaggagggtatgctcctcccccaccgcaa
cctcctatgggtggaatgggaatgccgggaatgccaccaatgcctccttttggcttgcct
ccaatgggttactga

DBGET integrated database retrieval system