Medicago truncatula (barrel medic): 25491878
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Entry
25491878 CDS
T01716
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mtr03041
]
25491878
Spliceosome [BR:
mtr03041
]
Complex A
Other components
Complex A specific factors
25491878
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
RRM_1
KH_1
zf-CCHC
PHD_4
RRM_7
Motif
Other DBs
NCBI-GeneID:
25491878
NCBI-ProteinID:
XP_013455377
UniProt:
A0A072UK27
LinkDB
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Position
4:13897792..13902046
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AA seq
767 aa
AA seq
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MEALDSNPPPLNDNPQHQSETLIPQNGINGTTTTDNNDSRPLIPNQLLSENGLTGGNTRS
GTDKDQSGGEEETTSKRRRRSRWDPQPDSNDQNGEAATGTKKRKSRWADDEPKPVIQLPD
FMGGIEFDPEIQTLNSRLLEISRMLQSGLPLDDRPEGARSPSPEPIYDNMGIRINTREYR
ARERFQKERQEIISQIIKKNPAFKPPADYRPPKLQKKLYIPMKEYPGYNFIGLIIGPRGN
TQKRMEKETGAKIVIRGKGSVKEGRLQQKRDLKPDPSENEDLHVLVEADTADALEAAAGM
VEKLLQPVDEVLNEHKRQQLRELAALNGTIRDEEYCRLCGEPGHRQYACPTRTSTFKSEV
VCKHCGDGGHPSIDCPVKGATGKKMDDEYQNFLAELGGTVPESAIKTTSTLAIGSGSSGS
NPPWANNSGSGGSTPQAGLGAGAVKKEIDDTNLYIGYLPPTLEDDGLIQLFQQFGEIVMA
KVIKDRITGLSKGYGFVKYADITMANNAIVAMNGYRLEGRTIAVRVAGKPPQPVVPPGPP
ASAVPTYPVQSQPIGAYPSQQYTGGGPIGNAPPGSYGGTPVPWGPPIPPPYNPYAPPPPG
STMYPPMHSQPMPPYGVQYPPMPTGPPGATPPPPASGEMQQNYPPGVQSDNNSSTQSVPT
NMYGNTMPSMPPAAPPTYPASYGYPPPPYYNAVPPPPPPPAPTSDQSHSIANAPWASNHS
APPPLSSADQSQSIGNVPPPMPPPNSSAEKTSYGADSEYEKFMAEMK
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggaggctctcgattccaatccaccaccgctcaacgataatccacaacaccaatccgaa
accctaatcccccaaaatggcatcaacggcaccaccaccaccgataacaacgattcacgt
ccactgattccaaatcaacttctctccgaaaacggtttaaccggcggcaacacccgaagc
ggaaccgacaaagatcaatcaggcggagaagaagaaacaacaagcaaacgccgccgtaga
agtcgatgggacccacagccagattcaaacgatcagaacggcgaagccgccaccgggacg
aagaaaaggaaatccagatgggcggatgacgaaccgaaaccggtaattcaacttcctgat
ttcatgggtggtattgaatttgatcctgaaattcaaacattgaatagtagattgcttgag
attagtagaatgttgcaatctggtttgccattagatgatcgtcctgaaggggctagatct
ccttcgcctgaacctatatatgataatatggggattaggattaatactagagagtatcgt
gctcgtgagaggtttcagaaagagagacaagagattatttctcagattattaagaaaaat
cctgcttttaagccacctgctgattatagaccaccaaagcttcagaagaagctttacata
ccgatgaaagagtatccgggttataattttattgggcttataattgggccaagggggaat
actcagaagaggatggagaaggagactggtgctaagattgtgattcggggtaaagggtcg
gtgaaagaagggaggttgcagcagaagagggatttgaaaccggatccgtcggagaatgag
gatttgcatgttttggttgaggcggatacggctgatgcacttgaggctgcggctggtatg
gtggagaagctattgcagcctgtggatgaggttttgaatgagcataagaggcagcaactt
agggagcttgcagctttgaatgggacaattagggatgaagagtattgtaggttgtgcggt
gagcctgggcatcgtcagtatgcttgtcctacaaggacttcgacgtttaagagtgaggtt
gtttgtaagcattgtggggatggtggtcatcctagtattgattgtccggtgaagggtgct
actggaaagaagatggatgatgagtatcagaatttcttggctgagttgggtggtacagtt
cctgaatctgcgattaagacaactagtactttggcaattggttcgggcagttctggaagc
aatcctccttgggctaacaattctggttctggtggtagtacaccacaagctggattaggg
gctggtgcagttaaaaaggaaattgatgatacaaatttgtacattgggtatttgccaccc
actcttgaggatgatggtttgatccaattgtttcaacaatttggtgagattgttatggca
aaagttattaaggatcgaataacaggtttgagtaaaggatacgggtttgtgaagtatgct
gatatcacaatggcaaacaatgcaattgttgccatgaatggttatcgccttgagggtcga
actattgcagtgagagttgctggtaagcctcctcagcctgttgtacctccaggcccacct
gcatcggctgtgcccacttatcctgttcaaagccagccaattggtgcctatccatcccaa
caatatactggtggtggtcccattgggaatgctcctcctgggagttatggaggtactcct
gtcccatggggacctcctattcctcctccctacaatccttatgctcctcccccgcctgga
tcaactatgtatcctcctatgcatagtcaacctatgcctccatatggtgttcaataccca
cccatgccgacaggtccccctggtgccactcccccacccccggcttctggtgaaatgcag
cagaattatcctcctggggtgcagtctgataataattcatctactcagtctgtaccgacc
aacatgtatggtaacacaatgccttcaatgccaccagcagctccaccaacatatcctgcc
tcttatggatatcctcctccaccttactataatgcagttcctccaccacctccccctcct
gcccctacttcagaccaatcacacagcattgcaaatgcgccttgggccagtaatcattcc
gccccacctcctctttcgtctgcagatcaatcccagagcattggaaatgtgcctccacct
atgcctcctcctaactcatcggcagaaaagacgtcatatggagctgattctgagtatgag
aaattcatggcagagatgaaatga
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