Medicago truncatula (barrel medic): 25493273
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Entry
25493273 CDS
T01716
Name
(RefSeq) serine/arginine-rich splicing factor SC35 isoform X1
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
25493273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mtr03041
]
25493273
Spliceosome [BR:
mtr03041
]
Common components
Common spliceosomal components
SR proteins
25493273
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Nup35_RRM
Motif
Other DBs
NCBI-GeneID:
25493273
NCBI-ProteinID:
XP_039689156
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All DBs
Position
4:45408505..45413542
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AA seq
281 aa
AA seq
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MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFA
FVRYKYADEASKAVDRLDGRMVDGREITVQFAKYGPNAERIQKGRIIETSPRSKSSRSRS
PSKRSRHRDDYKEKDYRRRSRSRSYDRHERDRHRGRDRDHRRRSRSRSASPGYKGRGRGR
HDDERRSRSPSRSVDSRSPVRRSSIPKRSPSPKRSPSPKRSPSLKRSISPQKSVSPRKSP
LRESPDNRSRGGRSLTPRSVSPRGRPGASRSPSPRNSNGDE
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacttcggtaggtcaggtcctccagacatctccgatacctactctcttctcgtt
ctcaacatcaccttccgtaccaccgccgatgacctatttccgttgtttgataagtatggc
aaggttgttgacatcttcatccccaaagatcgaaggaccggtgaatcaaggggtttcgct
tttgtgcgttacaaatatgctgatgaagcttccaaggctgttgataggctcgacggaaga
atggttgatggtcgtgaaataactgttcagtttgcaaaatatggccctaatgctgagagg
attcagaaaggaaggattattgaaacatccccgagatcaaagagctcaaggagccgcagt
cccagcaagagaagtaggcatcgtgatgactacaaagaaaaggattacaggaggagaagt
cgcagcaggagttatgataggcatgaacgtgacaggcaccgtgggagagatagggaccat
cgtcgccgaagcagaagccgtagtgctagtcctggttacaagggccgtggaagggggcgc
catgatgatgagcgtcgtagtagaagcccaagcagatcagtggacagccgctccccagtg
cgacgcagttctattcctaaaaggagcccgtctccaaagaggagcccttctccaaagaga
agcccttctctgaagaggagcatatccccccaaaagagtgtttcccccaggaaaagtcca
ctccgtgaaagtcctgataatcgtagccgtggtggaaggtctcttacgcctcgcagtgtc
tcaccacgaggtcgtcctggtgcttctcgaagcccctctcctcgaaattcaaatggtgat
gaataa
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