KEGG   Medicago truncatula (barrel medic): 25493882
Entry
25493882          CDS       T01716                                 
Name
(RefSeq) histone deacetylase 5
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
mtr  Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mtr03036]
    25493882
Enzymes [BR:mtr01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     25493882
Chromosome and associated proteins [BR:mtr03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     25493882
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 25493882
NCBI-ProteinID: XP_013457986
UniProt: A0A072UQR1
LinkDB
Position
4:53539428..53546956
AA seq 655 aa
MESESDETRIKTSNQQRRVGLLYDERMCKHYDPDDDRHPETPNRIRAIWDKLQTTGITDR
CLLLDAKEADDKHLLAVHTKNHVNLIKNISYKSYNSRSNAAAKLNSIYFNEGSTKSAYLA
AGSAIEAVKRVASKELQSAVAIVRPPGHHCEQHKAMGFCLFNNVAVAASYLLNDSPELGV
KKILIVDWDVHHGNGTQKVFWNDSRVLFFSVHRHEFGRFYPCGDDGFYNMTGEGDGAGYN
INVPWENGRCGDTDYFAAWDHILLPVAKEFNPDIIIVSAGFDAAVGDPLGGCCITPFGYS
LLLKKLMNFAEGRIVLVLEGGYNLDSIAKSMHACVEVLLEDKPLMGSSEAFPFESTWRVI
QAVREELSPFWPTLACELPQNIICPVAPPPHTLLSSSDSETEDDKAPPKLENVAELLEDV
IKPLSNLKVDADEDPDASCSWRSKLSNVYVWYASYGSNMWRPRFDCYIAGGQVEGMQKLC
SGSMNKTLPDEIFWKTFPCHIFYGRESSHSWGPGGVAFLNPEKNSQHKTYMCMYKISLEQ
FNDVLFLENGLSLDVDSALFDMATLNAISNKEFGSQEVLKNGWYGNAVYLGKEQDIPIIT
MTCPLLDIELFKSGELPLCAPNKSYANTLIRGLVEGEQLSEAEAIAYIDAAAKSL
NT seq 1968 nt   +upstreamnt  +downstreamnt
atggagtcagaaagcgacgagaccagaatcaaaaccagcaatcaacaacgtcgcgttggt
ttactctacgacgagaggatgtgtaagcactacgatccagacgacgatcgccatcccgaa
actcccaatcgcattagggctatttgggacaagctccaaaccactggcattactgatcga
tgtctacttttggacgctaaagaagctgacgacaaacatttactagcggtccatactaaa
aatcatgttaatttgattaagaatataagctataagagttataattcaaggtctaatgct
gctgccaaacttaattctatatatttcaacgaaggttcaacaaaatctgcctatcttgct
gctggcagtgctatagaggcggttaaaagagtggctagcaaggaattacaatctgctgtt
gctattgttaggcctccaggtcatcattgcgagcaacataaagctatgggattttgtctg
ttcaacaacgtggcagttgctgcatcgtatctcttaaatgatagtccagaacttggtgta
aagaaaattttaattgttgactgggacgttcatcatggaaacggtactcaaaaagtgttt
tggaatgattctcgagtgttattcttctccgttcacaggcatgaatttgggagattttat
ccatgtggtgatgatggcttttataacatgactggagaaggagatggtgctggatacaat
ataaacgtgccatgggagaatgggagatgtggtgatacagactattttgcagcgtgggac
cacatcttgctccctgttgccaaagaatttaatccagacataattatagtttctgctgga
tttgatgctgctgttggagaccctttgggtggatgttgcatcacaccatttggttattcc
cttctgttgaaaaagttgatgaattttgctgaaggtaggattgtactggttttagaaggt
ggctataatcttgactcaattgcaaaatcaatgcatgcttgtgtggaagttttgcttgaa
gacaagcctcttatggggtcttcagaggcctttccatttgagtctacatggcgtgtgatc
caagcggtccgcgaggagttaagtcccttttggcctacacttgcttgtgaattaccacaa
aatataatttgtccagtggcaccacctccgcatactcttttatcaagctccgactctgag
actgaggatgacaaagctccaccgaaattagaaaatgttgcagagctgcttgaggatgtc
atcaaaccactttccaacctcaaagttgatgcagatgaagatcctgatgcttcgtgttcc
tggcgatccaaattgtcaaatgtttacgtatggtatgcttcttatggctcaaatatgtgg
agaccaagatttgattgctacatagctggtggacaggtggaaggtatgcagaagttgtgc
tctggttcaatgaataaaactcttccagatgagatcttttggaagactttcccttgtcat
atattttacggtcgtgaatcctcacattcatggggtcctggaggtgttgcgtttcttaat
cctgagaaaaattctcagcacaagacctacatgtgcatgtacaaaatttcgctagagcag
ttcaatgatgttttatttttggaaaatggtctaagccttgatgtagactctgctttattt
gatatggctactttgaatgccatctccaacaaggagttcggttcgcaggaggttctcaaa
aatggttggtatggtaatgctgtctacttaggaaaggagcaagacattcccataattact
atgacgtgtccgcttcttgacattgagctcttcaaatctggggagctaccattgtgtgcg
cctaataaatcgtacgccaataccttgataagagggttggtagagggagaacagctatca
gaggctgaagccattgcttacatagacgctgctgctaaatcgttatga

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