KEGG   Medicago truncatula (barrel medic): 25495139
Entry
25495139          CDS       T01716                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    25495139
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mtr03019]
    25495139
   03041 Spliceosome [BR:mtr03041]
    25495139
Messenger RNA biogenesis [BR:mtr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     25495139
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     25495139
Spliceosome [BR:mtr03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    25495139
SSDB
Motif
Pfam: RRM_1 RRM_7 SF3a60_bindingd BRAP2 Nup35_RRM Prophage_tailD1
Other DBs
NCBI-GeneID: 25495139
NCBI-ProteinID: XP_013450761
UniProt: A0A072U4W5
LinkDB
Position
6:complement(443062..446721)
AA seq 383 aa
MESPKNEHIIGTGGEQNDVGRNYEHEHEQQHHNSQSLTGDGASPGKIFIGGLARETTIAQ
FIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDKVIEDSHIINSKQVEIKRTI
PRGAVGSKDFRTKKIFVGGIPSNVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFVT
FDTEEAVDDLLSMGNKIEFAGTQVEIKKAEPKKANAPPPSSKRYNDSRSSYGSGGYGDAY
DGFGGGFGGVGGGYSRSGSAYGGRGGPYGGYGSEFAGYGGYAGAMGGPYRGDPSLAYAGR
YGGSFRSSYDLSGYGGPGESYGAYGGAGAGAAAGGGGSSGAGAYQSGYDASLGGGYGGAA
SGASFYGSRGGYGGAGRYHPYGR
NT seq 1152 nt   +upstreamnt  +downstreamnt
atggaatcacccaaaaacgaacacatcattggaaccggaggtgaacaaaacgacgtcggt
agaaactatgaacacgaacatgaacaacaacatcataactctcaatcccttaccggtgat
ggtgctagtcctggaaagatattcataggtggtttagcgagagaaacaaccattgcccaa
tttatcaagcactttggtaaatatggtgagattactgattcggtcatcatgaaggacagg
aaaactggacagcctcgtggatttgggtttattacttatgctgatccatctgtggttgat
aaagtcatcgaggactctcatatcatcaatagcaaacaagttgagattaagcggactata
ccaaggggagctgttggctctaaggattttaggacaaagaaaatatttgtaggtggtatt
ccttcaaatgtgactgaagatgaatttagagatttttttacacgctatggagaagtcaaa
gatcaccaaataatgcgtgaccactctactaatcgttcacgtggctttgggtttgtcacc
tttgacactgaggaagctgttgatgatcttctatctatggggaacaagattgagtttgct
ggcactcaggtggaaatcaagaaggctgaaccaaagaaggcaaatgcaccacctccatca
tccaagcgctacaatgactcaaggtcttcatacggcagtggtgggtatggagatgcttat
gatggatttggtggcggatttggtggtgttgggggtggttacagcaggtctggcagtgct
tatggtggtagaggtggtccgtatggtggctatggaagtgagtttgctgggtatggtgga
tatgctggagcaatggggggaccctacagaggagatccttctctagcatatgcaggtcgt
tatggtggaagctttagaagcagctatgatcttagtgggtatggcggacctggtgagagt
tatggggcttatggtggtgccggtgcaggtgctgctgctggcggaggtggttcttctggt
gctggtgcatatcaaagtggctatgatgctagccttggcggtggatatggaggagcagct
agtggagcttctttctatggaagcagaggtggatatggtggtgctggtcgatatcatccg
tatggaagatag

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