Medicago truncatula (barrel medic): 25495726
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Entry
25495726 CDS
T01716
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
25495726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtr03021
]
25495726
03036 Chromosome and associated proteins [BR:
mtr03036
]
25495726
Transcription machinery [BR:
mtr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
25495726
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
25495726
PBAF complex
25495726
GBAF(ncBAF) complex
25495726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
YEATS
Motif
Other DBs
NCBI-GeneID:
25495726
NCBI-ProteinID:
XP_013451410
UniProt:
A0A072UI25
LinkDB
All DBs
Position
6:8642420..8645798
Genome browser
AA seq
558 aa
AA seq
DB search
MSVNNNNNPSKGIGASSSSFGNAGMPSNSMSTNPVFSQAQAQAQAQAQAQAQMAAGFQGQ
FPQSQAHAIVQAQNKAQAQAQAHAQAAAVAHAQLQAHLQAQGLSLNQNQVGGLGNLGVSS
SSMSTPGSGSAKRGPLKPPMRPVGFPPQNNFSPLRPMELTPAAARRKKQKLPEKPMQERV
AAILPESALYTQLLEFESRVDAALSRKKVDIQEALKNPPCIQKTLRIYVFNTFANQIRTI
PKKPNAEPPTWTLKIVGRVLEDGVDPDQPGVVQKSSPMYPKFSAFFKKVIITLDPRLYPE
NNTIMWDSYRSPAPQEGFEVKRKGDKEFSVNIQFYMNYAPEKFKLSPALTEVLAIDVDTR
PRIIAAIWHYVKARKLQNPSDPSFFHCDQPLQKVFGEEKVKFTTVSQKISPHLFPPPPIV
VEHQIKLSGNSPAGSACYDAMIDIPFPIQRELSALLANVEKNKEIETCDESICGIIRKIH
EHRRRRAFFLGFSQSPVEFINALIESQSRDLKAAAGEPSRSAEKERRADFFNQPWVEDAV
IRYLNRKPAAGSDAPGST
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgaacaataataacaacccttctaaaggcattggtgcttcttcatcatccttt
ggtaatgctggaatgccctctaattctatgtctacaaaccctgttttttcacaagcccaa
gcccaagcccaggctcaagctcaagctcaagcccaaatggctgctggttttcaaggccag
tttccacagtcacaagcccatgctatagttcaagcacaaaataaggctcaggctcaagct
caggctcatgcacaagctgcagcagtagctcatgctcagctccaggctcatttgcaagct
caagggttgagtcttaatcagaatcaggttggtggtttagggaatttaggtgtttcgtcg
tcgtcgatgtctacgcctgggagtggcagtgcgaaacgtggtcctttgaaaccacctatg
aggccggttggatttccgcctcagaataatttctcaccgttgagaccaatggaactcacg
cctgctgctgcacggagaaagaagcagaagcttcctgagaaaccgatgcaggaaagggtg
gctgctatattgccggaatctgctctttatacacagcttctcgagtttgagtctcgtgtg
gatgctgcactttctagaaagaaggttgatattcaggaagcgctgaaaaatccgccttgt
attcagaaaactcttcgtatttatgtatttaacacttttgcgaaccaaattcgcacgata
cctaagaagccaaatgccgagcctccgacgtggacactgaagatagttgggagggtattg
gaagatggtgttgaccctgatcagccgggagtagttcagaagtcgtcaccgatgtatcca
aagttctcggctttctttaaaaaagtaatcattactttggatccgaggctatatcctgag
aacaacactattatgtgggatagttatcgatcacctgctcctcaagaaggttttgaagtg
aagaggaaaggggataaagagttttcggtgaatatacagttttatatgaattatgcacct
gagaagtttaagctttcaccagcattgacggaagttcttgctatcgacgttgatactcgt
ccaagaattattgctgcaatatggcactatgtgaaggctaggaaactgcagaaccctagc
gacccttctttttttcactgtgatcagcctcttcagaaagtatttggggaagaaaaggtg
aagttcacaacggtttcgcagaaaatatcaccacatttgttccctccaccacctatagtt
gtggagcatcagatcaaactatcgggaaatagtccagctgggagtgcttgttacgatgcg
atgattgatattccttttcctattcaaagggagttgtctgcactattggcaaatgttgag
aagaacaaagagattgaaacatgtgatgaatcgatatgtggaatcattagaaaaatccac
gagcatcgtaggagacgggcattctttcttggtttcagtcaatctccagtagaatttatt
aatgccttgattgagtctcaaagcagggatctgaaagctgcagctggagaacctagtcgc
agtgctgaaaaagagcgccgagcagattttttcaaccaaccatgggttgaagatgctgtt
attcgatatttgaatcgcaaaccagctgcaggaagtgatgctccaggaagcacatga
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integrated database retrieval system
