Medicago truncatula (barrel medic): 25499124
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Entry
25499124 CDS
T01716
Name
(RefSeq) pre-mRNA-splicing factor 18
KO
K12817
pre-mRNA-splicing factor 18
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
25499124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mtr03041
]
25499124
Spliceosome [BR:
mtr03041
]
Complex C
Other components
Step II factors
25499124
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Prp18
PRP4
PolyG_pol
Motif
Other DBs
NCBI-GeneID:
25499124
NCBI-ProteinID:
XP_013449742
UniProt:
A0A072UD53
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Position
7:44830399..44834590
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AA seq
411 aa
AA seq
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MDLLKQELLKKRQSLAEETGGKKFFKRSEIQQKQIQKLREEEKRELEAKSKKRNSTTSDT
VSTVTTSSTNASSSVTSAAASSSASLPDEQNIDSLVLPKQEVIRRLRFLKQPVTLFGEDD
DVRLDRLKYVLKAGLFEVDSDMTEGQTNDFLRDIAELRKRQKTGILSDRKRQKAEDGAAE
DGDGGAGDDDLSDCGGSSGGDNDKDLKRMKANFEELCDEDKILVFFKKLLNEWKQELREM
AETEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLQDDIRQALMLMVDCCMRRDYLAAM
DHYIRLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQ
RRYPTLPSKAVEFNSLANGSDLQSLLAEERFSGGNQSSEERLRIMPAPRES
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggaccttctaaagcaagagcttctcaaaaaacgccaatccctagccgaagaaaccggc
ggcaagaaattcttcaaacgctccgagatccaacagaaacaaatccaaaaactccgcgaa
gaagaaaaacgcgaactcgaagccaaatctaaaaaacgcaactcaacgacttccgatacg
gtctccaccgtaacaacctcatcaaccaacgcttcctcctccgtcacatccgctgctgct
tcatccagcgcttccctccccgatgaacaaaacatcgacagcctcgtccttcctaaacaa
gaagtcatccgccgtcttcgttttctcaaacaaccggtgacgctattcggcgaagacgac
gatgtgagactcgatcggcttaaatacgttctcaaagctggattgtttgaagtggatagt
gatatgacggagggacagacgaatgatttcttgcgtgatatcgcggagttgaggaagagg
cagaagacggggattttgagtgataggaagcggcagaaggctgaggacggtgctgctgag
gatggtgatggtggtgctggtgatgatgatttgagtgattgtggtggatctagtggtggt
gataatgataaggatttgaaaaggatgaaggcgaatttcgaggagttgtgtgatgaggat
aagattttggtgtttttcaagaagctgttgaatgagtggaaacaggagttgcgtgagatg
gcggagacggagaagcggactgctaaagggaagtctatggttgctacattcaagcagtgt
gcgcgatacttgaacccgctgtttaagttttgtaggaagaaggttcttcaggatgacatt
cggcaggcactaatgttgatggttgactgctgtatgaggcgagattatctggctgcaatg
gaccattatatcaggctggctatcgggaatgctccctggcctattggtgttactatggtt
ggtattcacgaaagatctgcccgtgaaaagatctacacaaatagtgttgctcacatcatg
aatgatgaaacaactcgtaagtacttacaatcagtgaagaggttaatgacattttgccaa
cggcgttacccgacattgccatcaaaagcagttgagtttaacagtttggcaaatgggagt
gatctgcagtcacttttagcagaagagagatttagtgggggcaatcagtcatctgaggag
aggcttaggataatgcctgctccaagagaaagttag
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