KEGG   Medicago truncatula (barrel medic): 25499390
Entry
25499390          CDS       T01716                                 
Name
(RefSeq) splicing factor U2af small subunit B
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    25499390
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mtr03041]
    25499390
Spliceosome [BR:mtr03041]
 Complex A
  U2 snRNP components
   U2 related factors
    25499390
 Complex B
    25499390
SSDB
Motif
Pfam: zf-CCCH RRM_1 Torus zf_CCCH_4 iSTAND DNA_alkylation zf-CCCH_4
Other DBs
NCBI-GeneID: 25499390
NCBI-ProteinID: XP_013450093
UniProt: A0A072U424
LinkDB
Position
7:48893552..48896395
AA seq 327 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLN
FINPTPNQPQQPQPPQPPQPESLDPDKLQEHFDDFYEDLFEELSKYGQIQSLNICDNLAD
HMVGNVYVQYKEEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGG
YCNFMHLKKISRDLRKRLFGRSSRRWNDRSGSRSRSPPRNRNYEGRSYSGRGSGRRDLDR
SHGSHGRRPRSRSPRHRGRRSRSPVGRDRSPNPVRGERESSVERRARIEQWNREKEVGDS
GNKDNKSNNDYEEAGLKNGSDSGNHQI
NT seq 984 nt   +upstreamnt  +downstreamnt
atggcggagcatttagcatcgatattcggaacagagaaagacagagttaactgtccattc
tacttcaagatcggagcttgtagacatggtgaccgctgttctcgtcttcataccaaaccc
accattagtcccactcttgttctctccaatatgtatcaacgtcctgatatgaaccttaac
tttatcaatcctactcctaatcaacctcaacaacctcaacctcctcaaccacctcaacct
gaatctctcgaccctgataaactccaagaacacttcgatgatttttatgaagatctattt
gaggagctgagcaagtatggtcaaattcagagcttgaatatttgtgacaatttggctgat
catatggttggcaatgtatatgttcagtataaagaggaagaccatgctgctaatgctctt
atgaatctcactggaagattttattcaggccgaccaatcattgttgacttctctcctgtt
acggattttcgagaagctacttgtaggcagtacgaagagaatgtatgcaatcgaggtggc
tactgcaactttatgcatctaaagaagattagcagagatttgaggaagcgattattcgga
agaagtagtaggcgttggaatgaccgtagtggaagcagaagccggagccccccgaggaat
cgtaactatgaggggcgttcatattctggccgtggttctggtagaagggatttggacagg
tctcatggctcccatggtagaaggccaagaagccgtagtcctcggcatagaggaaggcgg
agtagaagtccagtgggcagagataggagtccgaatccggtcagaggagaaagagaaagt
agtgtagaaaggagagctagaatagaacaatggaacagggagaaggaagttggagattct
ggtaacaaagacaataagagtaacaatgattatgaagaggcgggcttaaaaaatggcagt
gattctggcaatcatcagatatag

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