Medicago truncatula (barrel medic): 25499577
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Entry
25499577 CDS
T01716
Name
(RefSeq) RNA-binding protein BRN1 isoform X2
KO
K13207
CUG-BP- and ETR3-like factor
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mtr03041
]
25499577
Spliceosome [BR:
mtr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
25499577
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
BRAP2
MARF1_RRM1
GHMP_kinases_C
Motif
Other DBs
NCBI-GeneID:
25499577
NCBI-ProteinID:
XP_013450327
UniProt:
A0A072UF20
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All DBs
Position
7:complement(50902374..50907341)
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AA seq
433 aa
AA seq
DB search
MAETKEESKSNNEESVKLFVGQVPKHMTEDELLTLFKEFAIVDEVNIIKDKATRASRGCC
FVICPSRDEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNISEVEV
SALFSKYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVK
WADTEKERQARRAQKAQSQASNVGHDSQHPSLFGAMPMGYVPPYNGYGYQAPGSYGLMPY
RMPPPMQNQPGYHNMMPHMNQGNALRPDLGPNMNPRNYHVPPASYVGSYPAVPGLQHPMA
YPGGMISPRPLNSPPGSVSPSGGNGNSATSSGSSKNSGGGQAEGPPGANLFIYHIPQEFG
DQELANAFQPFGRVLSAKVFVDKATGVSKCFGFVSYDSPEAAQSAISMMNGCQLGGKKLK
VQHKRDNKPGKPY
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaacaaaggaagagagtaaatctaacaacgaagaaagtgtgaaattgttcgta
ggtcaagtaccgaaacacatgacggaagatgagttacttacattgttcaaagaatttgct
atagttgacgaagtcaacatcatcaaagacaaagctacacgcgcttctcgaggttgttgt
ttcgtgatttgtccttctagagatgaagctgataaggccgttaatgcgtgtcacaataag
aaaacattaccaggggcatctagtccattgcaagtgaagtatgcagatggcgagttggaa
agattagaacacaaactcttcattggcatgcttccaaagaacatttctgaagttgaagta
tccgcacttttctccaagtacggaactataaaggatttacaaattttaagaggttctcaa
cagacaagcaaaggttgtgcatttttgaagtatgaaacgaaagaacaagctcttgctgct
ttggaggcaatcaatggaaagcacaaaatggagggttcaagtgttccgttagttgtcaaa
tgggctgatactgaaaaggaaagacaagcccgaagagctcagaaagcacagtctcaagct
tctaatgtgggacatgattctcagcatccttcattatttggagccatgcctatgggttat
gttcctccatataacggttatggttatcaggctcctggaagttatgggctcatgccgtac
cgcatgccaccaccaatgcagaatcaacctggttaccataatatgatgcctcacatgaat
caaggaaatgcattgcggccagatctcggccccaatatgaatcctagaaactatcatgtg
cctcctgcaagttatgttggctcttatcctgctgtgccagggctacaacatccgatggca
tatcctggaggaatgataagtccaagacctttgaatagtcctcctggttctgtttcacct
tccggtggaaatggcaactccgctacatcatcagggtccagcaaaaattctggtggtggt
caagctgaaggaccacctggcgcaaatctgtttatctatcacatacctcaagaatttgga
gatcaagagcttgctaatgcctttcaaccatttggtagagttttgagtgctaaagttttt
gttgacaaagctaccggtgttagcaaatgttttgggtttgtaagttatgattccccagaa
gctgctcaatctgctattagtatgatgaatggatgccaattaggaggtaagaaattaaag
gttcagcataagagggacaacaaacccggtaaaccttactga
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