Medicago truncatula (barrel medic): 25499578
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Entry
25499578 CDS
T01716
Name
(RefSeq) U1 small nuclear ribonucleoprotein C
KO
K11095
U1 small nuclear ribonucleoprotein C
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
25499578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mtr03041
]
25499578
Spliceosome [BR:
mtr03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
25499578
Complex B
25499578
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-U1
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
25499578
NCBI-ProteinID:
XP_013450330
UniProt:
A0A072U5H3
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Position
7:50926838..50929341
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AA seq
222 aa
AA seq
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MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRQYYLQFEEQQTQSLIDQRIKEHLGQ
AAAFQQVGVAFNPMMAQRPSMPILPPPRLPIPGSVPGFGGQQLFPGMRPMMMPRPGPIAP
GGYYSAPGMPPTLPPPGAPLVPGQTNTLPRPPTLPPPPMVPGNTAAPASNGAPPMVSSAT
YPANSSAPSTGGYESYNANAQPPSTGGYESYNANTQPPEGNN
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgctattactgtgactactgcgatacctacttgacccacgattctccatctgta
agaaagcaacataattcaggttacaaacacaaggcaaatgtgaggcaatactacctgcaa
tttgaagagcaacaaacccaaagtttaattgatcaaaggattaaggaacatctcgggcaa
gctgcagcatttcagcaagttggtgtagcttttaatcccatgatggctcaaaggccttct
atgcccatcttgccaccaccaaggttgccaattcctggaagtgttccaggctttggtgga
caacaacttttcccagggatgagacctatgatgatgcctaggccaggtcctattgcacca
ggaggatattattctgcacctggcatgccaccaactttacctccacctggtgctccctta
gtacctggtcaaacaaatacccttcctaggccgccgacactacctccaccaccgatggtt
cctggaaacactgcagcaccagcctccaatggtgctccccccatggtttcatcagcaaca
tatccagccaattcatcagcaccgtcaaccggaggctatgaaagttacaatgccaacgct
caaccaccatcaaccggaggctatgaaagttacaatgccaacactcaaccacctgaggga
aataactaa
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