Medicago truncatula (barrel medic): 25500741
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Entry
25500741 CDS
T01716
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
25500741
Enzymes [BR:
mtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
25500741
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
25500741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-ANAPC11
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_5
RINGv
FANCL_C
Motif
Other DBs
NCBI-GeneID:
25500741
NCBI-ProteinID:
XP_013444680
UniProt:
A0A072TYT4
LinkDB
All DBs
Position
8:10362305..10363102
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AA seq
265 aa
AA seq
DB search
MDSVFSTILIILAILFITFMLSLMLRFLQLRINRRRLLSDSTPPRSPPPLTTIVTESPPA
SLNIDSLPPIPFHFTSDSTPPSSQPPQPAPEIQRAIDSLPTFHFSSISTTATATADCAVC
LTAFSTTDLLRALPRCCHAFHSDCIDNWLRSSNLSCCPLCRSTIFASESDLAAILRSPSD
SFRVEIGNVTYPEAVGGDALSSYSIGGSFDYRVMEVSQVPVSAVSSRTGSFRGSGRFFGG
SSRRIEANRIGEEITEMFRWLSGDY
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atggattcagtattctccaccattctcatcattctcgctattctcttcatcaccttcatg
ctttcactcatgctccgtttccttcaactccgcataaatcgccgacgtctcctctccgat
tcaacaccaccgcgatcaccaccaccattgacgacgattgttactgagtcgcctccagct
tcactaaacatcgactcactccctccgattccgttccatttcacctccgattcaacacca
ccgtcgtcgcaaccacctcaacctgcgccggaaatacaacgagcaatcgattcacttcct
acgtttcatttctcctccatttccacgaccgctaccgccactgccgactgtgcagtttgc
cttaccgcgttcagcaccactgacctcctccgcgctctccctaggtgttgtcacgccttt
cactccgactgtattgacaattggctccgttcttccaacctctcatgttgtccgctttgc
cgttccacaattttcgcttcagaatccgacctcgcggcgattctccgatcaccttccgac
agtttccgagttgaaattggaaatgtgacttatccagaagctgtcggcggagacgcattg
tcatcatattccattggaggatcattcgattatcgtgtaatggaggtatcgcaggttccg
gtgagtgcagtttcatcgcgaacggggtcatttcgtggttctggaaggttcttcggtgga
agtagtcgcagaatcgaagctaacagaataggtgaggagattaccgaaatgtttcgttgg
ctttcaggggattattag
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