Medicago truncatula (barrel medic): 25501710
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Entry
25501710 CDS
T01716
Name
(RefSeq) small nuclear ribonucleoprotein-associated protein B'
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
25501710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
25501710
03041 Spliceosome [BR:
mtr03041
]
25501710
03032 DNA replication proteins [BR:
mtr03032
]
25501710
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
25501710
Spliceosome [BR:
mtr03041
]
Complex A
U1 snRNP components
Sm proteins
25501710
U2 snRNP components
25501710
Complex B
U1 snRNP components
25501710
U4/U6.U5 tri-snRNP components
25501710
Complex C
U2 snRNP components
25501710
DNA replication proteins [BR:
mtr03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
25501710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
25501710
NCBI-ProteinID:
XP_013446522
UniProt:
A0A072TSQ6
LinkDB
All DBs
Position
8:38441377..38445510
Genome browser
AA seq
269 aa
AA seq
DB search
MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPVKGKKTT
DGDREERRTLGLLLLRGEEVVSMTVEGPPPPEESRSKAVNAAAMAGPGIGRAAGRGIPPP
ATVIQAQPGLAGPVRGVGGPAPGMMQPQISRPPVSYPGGPPVMRPPPGQMPYPGMPGGPP
RPGGPPPQFAPPRPGGPPPPQFSMPPPQFGQRPMGPPPPGQMMRGPPPHPGMQGPPRPGM
PPPPGSGVPVFGPPRPGMPPPPNQQQQQQ
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcaaagagttccaaaatgcttcaatacatcaactaccgtatgcgcgtaacc
attcaagacggtcgtcaactcgtcggaaagttcatggccttcgaccgccacatgaatctc
gttctcggcgactgtgaagagtttcgcaaacttccaccagtaaaaggcaagaaaaccact
gatggcgaccgtgaagaacgccgcacactcggccttctcctcctccgcggtgaagaggtt
gtttcgatgactgttgaaggtcctcctcctccggaagaatctcgttccaaggctgttaat
gctgctgcaatggctggtcctggaattggtcgtgctgctggaagaggtattcctcctccg
gcgacagttattcaagctcagcctggtcttgctggtcctgttcgtggtgttggtggacct
gctcctggtatgatgcagccgcaaatctcgcgtcctccggtttcgtatcccggtggtccg
ccggttatgcgtccaccgcctggtcagatgccatatcccggtatgccaggtggtcctccg
agaccaggtggtccgccaccgcaatttgctcctccgagacctggtggtcctcctccgcca
caattttccatgccgcctcctcagtttggacagagacctatgggcccacctcctcctgga
cagatgatgagaggacctcctcctcatcctggaatgcagggaccgcctcgtcccggaatg
cctcctcctcctggaagtggtgttcctgtctttggtccgcctcgtcccggcatgccccct
cctccaaatcagcagcaacagcagcagtga
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