Micromonospora tulbaghiae: CSH63_16165
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Entry
CSH63_16165 CDS
T05651
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mtua
Micromonospora tulbaghiae
Brite
KEGG Orthology (KO) [BR:
mtua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mtua03016
]
CSH63_16165
Enzymes [BR:
mtua01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CSH63_16165
Transfer RNA biogenesis [BR:
mtua03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CSH63_16165
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AYF28963
UniProt:
A0A386WLR9
LinkDB
All DBs
Position
3590478..3591800
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AA seq
440 aa
AA seq
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MTDEPPLRRRAAESRTGEASADPTSALPEPADAGTETDPGAAVPLTAPRDGTPAPVATPA
ELDEVVARFAAGTGPVALDAERASGYRYSQRAYLVQLRRGGSGTALIDPLPLPDLSALDA
AIAETEWVLHAASQDLACLAEVGLRPRRLFDTELAARLAGFERVGLAALTEQLLGFSLEK
HHSAADWSSRPLPESWLTYAALDVELLVDLRDALDEELQRQGKSGWAAEEFDALVRNGAR
PPRVRAEPWRRTSGIHRVRGARAQARVRSLWYARDQIAARRDAAPGRVLPDSAIVAAAEL
DPKDEKTLLTLPGFGGRSVRRLARTWLAALDDARRLPDDALPVSPTVEGPPPPHRWAERD
PVAAGRLARAREVVVGTAGAHRLPAENLIAPDSIRRLAWQPPAEITDETVAETLRGFGAR
EWQIGLLLPALTEALRTPQQ
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgaaccacccctgcgccgtcgggccgccgaaagccgtaccggagaggcctcc
gccgatccgacgtcggccctgccggagccggcggacgcggggaccgagaccgacccgggc
gcggccgtccccctgaccgcgccgcgcgacggcacgcccgccccggtggccacacctgcc
gagttggacgaggtcgtggcccgcttcgcggccggcaccggcccggtggctctggacgcc
gaacgcgcctccggctaccgctacagccagcgcgcctatctggtgcagctgcgccgcggc
ggctccggcaccgcgctcatcgacccgctgccgctgcccgacctgtccgctctggacgcg
gcgatcgccgagaccgagtgggtgctgcacgcggccagccaggatctcgcctgcctggcc
gaggtggggctgcgcccgcgccggttgttcgacaccgaactggccgcccggctggccggg
ttcgagcgggtcggcctggccgcgctgaccgaacagctgctcgggttcagcttggagaag
caccactccgccgccgactggtccagccggccgctgccggagtcctggctgacgtacgcg
gcgctcgacgtggaactgctcgtggacctgcgcgacgcgctggacgaggagttgcagcgg
cagggcaagtccggctgggcggcggaggagttcgacgcgctcgtgcgcaacggcgcccgt
ccgccgcgcgtccgcgccgagccgtggcggcgcacgtccggcatccaccgggtgcgcggc
gcgcgcgcccaggcccgggtgcgttccctctggtacgcgcgggaccagatcgccgcccgc
cgggacgccgcgccgggccgggtgctgcccgactcggccatcgtggccgccgccgagctg
gacccgaaggacgagaagacgctgctcacgctgcccgggttcggtgggcggtcggtgcgc
cggctggcgcgcacctggctggcggcgctggacgacgcgcgccggctgccggacgacgcg
ctgccggtgagcccgacggtggaggggccgcctccgccgcaccggtgggccgaacgcgac
ccggtggcggccgggcggctcgcccgcgcccgggaggtggtggtcggcaccgccggggcg
caccgcctgccggcggagaacctgatcgcgccggactcgatccgccggctcgcgtggcag
ccgcccgcggagatcaccgacgagacggtcgcggagacgctgcgcgggttcggcgcccgg
gagtggcagatcggtctgctgctgcccgctcttaccgaggcgctgcgcaccccccagcag
taa
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