Mycobacterium tuberculosis CAS/NITR204: J113_06605
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Entry
J113_06605 CDS
T02652
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mtuc
Mycobacterium tuberculosis CAS/NITR204
Pathway
mtuc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mtuc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J113_06605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtuc03400
]
J113_06605
Enzymes [BR:
mtuc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
J113_06605
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
J113_06605
DNA repair and recombination proteins [BR:
mtuc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J113_06605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
zf-FPG_IleRS
zf-TFIIB
Ribosomal_S13
NFACT_N
OrfB_Zn_ribbon
DUF2752
Motif
Other DBs
NCBI-ProteinID:
AGL26417
UniProt:
R4MG48
LinkDB
All DBs
Position
1050659..1051150
Genome browser
AA seq
163 aa
AA seq
DB search
MSWRGVGRDTQPRALGPDALDVSTDDLAGLLAGNTGRIKTVITDQKVIAGIGNAYSDEIL
HVAKISPFATAGKLSGAQLTCLHEAMASVLSDAVRRSVGQGAAMLKGEKRSGLRVHARTG
LPCPVCGDTVREVSFADKSFQYCPTCQTGGKALADRRMSRLLK
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
ttgtcatggcggggcgttggccgggacacccagccgcgcgcgctcgggcccgatgcgctg
gacgtcagcaccgacgacctggccgggctgttggccggcaacaccggccggatcaagacc
gtcatcaccgaccagaaggtaattgccggcatcggcaacgcctatagtgacgaaatcctg
cacgtcgcgaagatctcgccgttcgccacggccggcaagttatccggcgcacagctcacc
tgcctgcatgaggcgatggcgtcggtgctgtcggacgcggtgcgccggtccgtcggccag
ggcgcggccatgctcaaaggggagaaacgttctgggcttcgagtacatgcgcgcaccggg
ttaccctgcccagtgtgcggtgacaccgtgcgggaggtgtccttcgcggacaagtctttt
cagtactgtccaacgtgtcagaccggtggcaaggcgctggccgaccggcgtatgtcgcgg
ctgctcaagtag
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integrated database retrieval system
