Mycobacterium tuberculosis Haarlem: TBHG_00928
Help
Entry
TBHG_00928 CDS
T02845
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mtul
Mycobacterium tuberculosis Haarlem
Pathway
mtul03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mtul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TBHG_00928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtul03400
]
TBHG_00928
Enzymes [BR:
mtul01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
TBHG_00928
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
TBHG_00928
DNA repair and recombination proteins [BR:
mtul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TBHG_00928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
zf-FPG_IleRS
zf-TFIIB
Ribosomal_S13
NFACT_N
OrfB_Zn_ribbon
DUF2752
Motif
Other DBs
NCBI-ProteinID:
EBA41430
LinkDB
All DBs
Position
1057320..1057820
Genome browser
AA seq
166 aa
AA seq
DB search
MSSSAGVLVAGTPQPRALGPDALDVSTDDLAGLLAGNTGRIKTVITDQKVIAGIGNAYSD
EILHVAKISPFATAGKLSGAQLTCLHEAMASVLSDAVRRSVGQGAAMLKGEKRSGLRVHA
RTGLPCPVCGDTVREVSFADKSFQYCPTCQTGGKALADRRMSRLLK
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
ttgtcatcgtcggcaggggtgctggtggccgggacgccgcagccgcgcgcgctcgggccc
gatgcgctggacgtcagcaccgacgacctggccgggctgttggccggcaacaccggccgg
atcaagaccgtcatcaccgaccagaaggtaattgccggcatcggcaacgcctatagtgac
gaaatcctgcacgtcgcgaagatctcgccgttcgccacggccggcaagttatccggcgca
cagctcacctgcctgcatgaggcgatggcgtcggtgctgtcggacgcggtgcgccggtcc
gtcggccagggcgcggccatgctcaaaggggagaaacgttctgggcttcgagtacatgcg
cgcaccgggttaccctgcccagtgtgcggtgacaccgtgcgggaggtgtccttcgcggac
aagtcttttcagtactgtccaacgtgtcagaccggtggcaaggcgctggccgaccggcgt
atgtcgcggctgctcaagtag
DBGET
integrated database retrieval system
