Methylocella tundrae: MTUNDRAET4_0140.1
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Entry
MTUNDRAET4_0140.1 CDS
T05970
Name
(GenBank) GAF modulated sigma54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
mtun
Methylocella tundrae
Brite
KEGG Orthology (KO) [BR:
mtun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mtun03000
]
MTUNDRAET4_0140.1
Transcription factors [BR:
mtun03000
]
Prokaryotic type
Helix-turn-helix
Other families
MTUNDRAET4_0140.1
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
GAF
Sigma54_activ_2
HTH_8
AAA_5
HTH_30
AAA_2
Mg_chelatase
HTH_28
HTH_50
Autoind_bind
AAA
Motif
Other DBs
NCBI-ProteinID:
VFU16485
UniProt:
A0A4U8Z6P5
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All DBs
Position
p2:complement(105261..107342)
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AA seq
693 aa
AA seq
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MHLDQLNEWAGTPEQSTGFGPGEERTIMKAWEDYLAGTSRQLKVRNVVAQSWERCAAIGI
DHKLPGSKTIIEQREFEQRLQRNRLLLQAAAKVLSEAQQLLIGSGSMLLLTDVDGVVLDA
VGDPGTLEAGQDINLVVGADWSEANAGTNGIGTTLASRAPVLIHGPEHFCALTKNWTCVG
APVRNPLDGALLGLVDMSGAKSTFQQHNLAFAVMVARGIEAALSLQLEVERRMLLEYSSG
IGRGWSDGVIVVDRGGQVVLANEHAPRLMAMRAKAREFADGSFHSDQPLLTLNKDGRSFD
LAAAARYGINPGNLLPVHHDGALIGAVVIAAAAQRPPAPAVIRSKAFEPIVTNCAIMLDA
IHRASRLAIYQAPVLIEGETGVGKELFARAIHDASPCADGPFIPFNCGAISRDLIATELF
GYVKGAFTGAASNGNIGRFERANNGTLCLDEIGELPLDLQPFLLRVLEEGAVCRVGDATP
RPIKVRLIAMTNRDLREEVEKGRFRRDLLYRLNVSTLKVPPLRKRDGDAVLLAQHFLNHL
SKKHDLGLRCFAPDVLRLFKTYPWPGNIRELRNVVESALLLCDTPVIGRGWLPEEIVDYR
LPEERSDLSASCRLPRLRADSCSLDEELPRASDLRSLGKQHIENVLHRFQGNISLTAAAL
GIARTTLYRRLKAYGLDMPRDSGSAPDADRVAE
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgcatctcgaccagttgaatgaatgggcggggacgcccgagcaatcgacgggatttggt
cccggcgaagaacgcaccatcatgaaagcctgggaagattatctggctggcacatcgcgt
cagctcaaggtgcgtaacgtcgtggcgcaatcctgggagcgatgcgcagcgataggcatc
gatcacaagcttcccggctccaagacaattatcgagcaacgcgagttcgagcagaggctg
cagcgcaatcgtctgctcctacaggccgcggcaaaagtgttgtcggaagcgcaacaactg
ctgatcggcagcggatccatgctgcttctcaccgatgttgacggagtcgtgctcgacgcg
gtcggcgatcccggcacgctggaggccggccaggacatcaacctcgtcgtcggggcggat
tggagcgaggccaacgcgggaacaaatggaatcggcacgacgctggcgtcgcgcgctccg
gttttgattcacgggccggagcacttctgcgccctgacgaaaaattggacctgcgttggc
gcgccagtccgcaacccgcttgacggggccctgctcggcctcgtcgatatgtccggcgcg
aagagcaccttccagcagcataaccttgcgttcgcggtcatggtggcgcgcggaattgaa
gccgcgctgtcgctgcaactcgaggttgagcgcagaatgctgttggaatacagctccggg
atcggcaggggctggtcagacggcgtcattgtcgtcgaccgcggcggtcaggtcgtgctg
gctaacgaacatgccccccgcctgatggcgatgcgggccaaggcgcgcgagtttgcggac
ggatctttccattcggatcaaccgcttctaacgctgaacaaggacggtagaagcttcgat
ctcgccgccgccgcgcgctatggcatcaatccgggcaatcttctgccggtccatcacgat
ggcgccttgatcggcgcggtcgtcatcgccgccgcggcgcagcggccgccggctcctgcg
gtcatacgctccaaagcctttgagccaatcgtcaccaattgcgccattatgctggacgcc
attcaccgcgcaagccggctcgccatctatcaggccccggttctcatcgaaggcgaaaca
ggcgttggcaaagagctgttcgcgcgggcaatccatgacgcaagcccctgcgccgatgga
ccgttcatcccattcaactgcggcgccatttcacgcgatctgatcgcaacagaacttttc
ggctatgtgaagggcgcgttcacgggcgctgcctcgaatggcaacatcggccgcttcgag
cgggccaataatggcacgctctgcctcgatgagatcggcgaactgccgctggatctccag
ccgtttctcctgcgcgttctggaggaaggcgcggtttgcagagtgggcgacgcgacgccg
cgcccgatcaaggtccggctcatcgcgatgaccaatcgcgatcttcgcgaagaagtcgaa
aaagggcgattccgtcgcgatcttttgtatcgactcaacgtttcgacgctcaaggttcct
cctttgcgcaaacgcgatggcgacgcggtcttgctggcgcaacatttcctcaaccatctt
tcaaagaagcatgatctcggcctgcgctgtttcgccccggacgtgctccgtcttttcaag
acctatccgtggcccggcaatattcgcgaacttcgcaatgtagtggagagcgcgctcctg
ctgtgcgacacgccggttatcggccgcgggtggctccctgaagagattgtggactaccgt
ctgccggaagaacgttcggatctgtccgcttcttgtagactgcctcgcctccgcgctgac
tcatgttcactggacgaagaattgccgcgagcaagtgatctgcgtagcctcggcaagcag
cacatagagaacgtgttgcatcgctttcagggaaacatcagcctgaccgcagcggccctt
ggaatagcgcgcacgacgctctaccgccgcctgaaagcctatgggctcgatatgccgcgc
gatagcggttcagcgccggacgccgatcgcgttgcggagtaa
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