Methylocella tundrae: MTUNDRAET4_1404
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Entry
MTUNDRAET4_1404 CDS
T05970
Symbol
udgb
Name
(GenBank) Type-5 uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mtun
Methylocella tundrae
Pathway
mtun03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mtun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MTUNDRAET4_1404 (udgb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtun03400
]
MTUNDRAET4_1404 (udgb)
Enzymes [BR:
mtun01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
MTUNDRAET4_1404 (udgb)
DNA repair and recombination proteins [BR:
mtun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MTUNDRAET4_1404 (udgb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
VFU08297
UniProt:
A0A4U8YWP3
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All DBs
Position
1:1262873..1263568
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AA seq
231 aa
AA seq
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MSADTSALQSPSRHARSEPGPNCPRCPRLVAFRQSVRVAEPTWHNAPVATFGDPIARALI
VGLAPGLRGANRTGRPFTGDFAGDLLYATLLEFGFAEGIYRASADDGLRLRDCAISNAVR
CVPPQNKPTTQEIAACRPFLKATIEDRPELRVIVALGRVAHESVLRAAGMKLSSFAFAHG
ATHDLWWPEGAPVRLFDSYHCSRYNTNTGVLTPLMFREVFAAVRRRIDELG
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcggacacttcggctctccaatcgccgtcgcgtcacgccagaagcgagccaggc
cccaattgtccccgctgtccgcgccttgtcgctttccgtcagtccgtccgggtcgcggag
ccgacgtggcataacgcgccggtcgccacctttggcgatcccattgcgcgggcgctcatc
gtcgggctggcgcccggacttagaggcgccaaccggacgggacgtcctttcaccggagat
ttcgccggcgatctgctttacgccaccctgctcgaatttggtttcgcagaagggatttat
cgcgccagcgcagacgacggcctgcgcctcagggactgcgccatcagcaacgccgtacgt
tgcgtgccgccccaaaacaagccgacgactcaggaaatcgcggcctgccggccctttctt
aaggcgacgatcgaggatcgccccgagcttcgcgttatcgtcgcgctcggccgcgtggcg
catgagtcggtcctgcgcgcagcggggatgaaattatcctccttcgcattcgcgcatggc
gcgacgcatgatctgtggtggccggagggcgcgccggtccgtcttttcgacagctatcat
tgctcgcgttacaacaccaacacaggcgttttgacgcctttgatgtttcgcgaggtcttc
gcggcggtgcgacgccggatcgacgagttggggtag
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