KEGG   Mycobacterium ulcerans: MUL_0878Help
Entry
MUL_0878          CDS       T00435                                 

Gene name
gadB
Definition
(GenBank) glutamate decarboxylase, GadB
  KO
K01580  glutamate decarboxylase [EC:4.1.1.15]
Organism
mul  Mycobacterium ulcerans
Pathway
mul00250  Alanine, aspartate and glutamate metabolism
mul00410  beta-Alanine metabolism
mul00430  Taurine and hypotaurine metabolism
mul00650  Butanoate metabolism
mul01100  Metabolic pathways
mul01110  Biosynthesis of secondary metabolites
mul01120  Microbial metabolism in diverse environments
mul02024  Quorum sensing
Module
mul_M00027  GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:mul00001]
 Metabolism
  Carbohydrate metabolism
   00650 Butanoate metabolism
    MUL_0878 (gadB)
  Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    MUL_0878 (gadB)
  Metabolism of other amino acids
   00410 beta-Alanine metabolism
    MUL_0878 (gadB)
   00430 Taurine and hypotaurine metabolism
    MUL_0878 (gadB)
 Cellular Processes
  Cellular community - prokaryotes
   02024 Quorum sensing
    MUL_0878 (gadB)
Enzymes [BR:mul01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.15  glutamate decarboxylase
     MUL_0878 (gadB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Pyridoxal_deC Aminotran_5
Motif
Other DBs
NCBI-ProteinID: ABL03510
Pasteur: MUL_0878
UniProt: A0PME1
LinkDB All DBs
Position
917436..918821
Genome map
AA seq 461 aa AA seqDB search
MSRSHSSVPAHSIAPAYTGRLFTAPVPALRLPEESMDPEAAYRFIHDELMLDGSSRLNLA
TFVTTWMDPEAGKLMAETFDKNMIDKDEYPATAAIETRCVSMVADLFHAEGLRDDDPSSA
TGVSTIGSSEAVMLGGLAMKWRWRQKVGKDWKGRTPNLVMGSNVQVVWEKFCRYFDVEPR
YLPMEKGRYVITPEQVVDAVDEDTFGVVAILGTTYTGELEPVAEICAALDRLAAGGGVDV
PVHVDAASGGFVVPFLHPDLKWDFRLPRVVSINVSGHKYGLTYPGVGFVVWRSPEYLPED
LVFRVNYLGGDMPTFTLNFSRPGNQVVGQYYNFLRLGREGYINVMQALSETARWLSAQLR
EVDHCELIADGSAIPVVAFRLAGDRGYTEFDLSHELRTFGWQVPAYTMPDNATDVSVLRI
VVREGLSADMARALHDDAVTSLRTLDKVKPGGNYDGQHFAH
NT seq 1386 nt NT seq  +upstreamnt  +downstreamnt
gtgtcccgtagccactcgtcggtacccgcacattcgatcgctccggcctacaccggccgg
ctgttcaccgctccggtaccggcgttgcggctgcccgaggagtcgatggatcccgaagcc
gcctaccggttcatccacgacgagctgatgctcgacggtagctcgcggctgaacctggcc
accttcgtcaccacctggatggatcccgaggccggcaagctgatggccgagacgttcgac
aagaacatgatcgacaaagacgaatacccggcgaccgcggcgatcgagacccgctgcgtg
tcgatggtcgccgacctctttcacgccgagggactgcgcgacgacgacccgtccagcgcc
accggggtgtccaccatcggctccagcgaggcggtgatgctcggcggcctggccatgaag
tggcggtggcggcagaaggtcggcaaggactggaaaggccgcacaccgaatctggtgatg
ggctccaacgtccaggtggtgtgggagaagttctgtcgctacttcgacgtcgagccgcgc
tacctgccgatggagaaggggcgctacgtcatcacccccgaacaggtcgtcgacgccgtc
gacgaggacaccttcggtgtggtcgcgatcctgggcaccacctacaccggcgagctggaa
ccggttgccgagatctgcgcggcgctggacagattggcggccggcggcggcgttgatgtg
cccgtgcacgtggacgccgccagcgggggcttcgtggtgccgttcctgcatccagacctc
aagtgggacttccggctgccgcgggtggtctcgatcaatgtcagcggtcacaaatacggg
ctgacctatcccggcgtcggattcgtcgtgtggcgcagccccgaatacctgccggaggat
ctggtcttccgggtcaactacctgggcggggatatgcccacattcacactcaacttctcc
cggcccggtaaccaagtcgtcggccagtactacaacttcctgcggctgggccgggagggc
tacatcaacgtcatgcaggccctgtcggagaccgcgcgctggctctccgcgcagctgcgt
gaggtagatcactgcgagctgatagcggacggttcggcgatcccggtggtcgccttccgg
ctggccggcgaccgcggctacaccgagttcgacctctcccacgagctgcgaaccttcggg
tggcaggtgcccgcctacaccatgccggacaacgccaccgacgtatcggtgctgcgcatc
gtggtgcgcgaaggtctgtccgccgacatggcacgcgccctgcacgatgatgccgtcacc
tcactgcgcacactggacaaggtcaagccgggcggcaactacgacggacagcacttcgcg
cactaa

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