Pseudoduganella umbonata: FCL38_13430
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Entry
FCL38_13430 CDS
T06138
Name
(GenBank) ATP-dependent DNA ligase
Organism
mum
Pseudoduganella umbonata
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
QCP11300
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Position
complement(3256943..3258586)
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AA seq
547 aa
AA seq
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MREFARLYAELDETTATNRKLDALKAYFSSAAPENAAWAVYFLAGGKPRQAIPVKLLRQY
ATEYAMLDEWLFDECYNAVGDLAETIAHILPEPKHRSDVGLAEWIEQRIAPLRGAAPETI
RAALFQYWDELETPERFLLVKLIGGGFRVGVSKLLVTRALSGIAAVDAKRIAQRLMGWTD
GSVRPTAKGFLQLIAQESPDEHAQRGGQPYPFFLAHQLNNDPATLGELDRWQVEWKYDGM
RAQVVRREGSWVWSRGEDLITERFPELAALRLPDGTVVDGEILVWRDGDGTDAPAPFADL
QKRIGRKALSAKFLAEYPAVLVAYDLLERDGVDLRKLPQCERRTLLEQLVAEMDTPQLRI
SPLVEADSWEALATIREESRMRGVEGMMLKAKDAQYGVGRTKDVGTWWKWKIDPYSVDAV
LIYAQAGHGRRASLYTDYTFAVWDSDGNGGRQLVPFAKAYSGLTDAEITQVDNAVRRTTI
ERFGPVRSVRPTMVFEIGFEGIQASPRHKSGIAVRFPRILRRRDDKSVEEADTLDMLKGL
LAGASGA
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagttcgcgcgcctgtacgcggagctggacgaaaccaccgccaccaaccgcaag
ctcgatgcactgaaggcgtatttcagcagcgccgcaccggaaaacgccgcgtgggcggtg
tatttcctggcaggcggcaagccgcgccaggcgatccccgtgaaacttctgcggcagtac
gccaccgaatacgcgatgctcgacgaatggctgttcgacgagtgctacaacgccgtcggc
gacctggccgaaaccattgcccatatcctgcccgagccgaagcaccgcagcgacgtcggc
ctggccgagtggatcgaacagcgcattgccccgctgcggggcgcggcgccggaaaccatc
cgcgccgcgctgttccagtactgggacgaactggaaacgcccgagcgcttcctgctggtc
aagctgatcggcggcggcttccgcgtcggcgtatcgaagctgctggtgacgcgggccctg
tccggcattgccgcggtggacgccaagcggatcgcgcagcggctgatgggctggaccgac
ggcagcgtgcgccccacggcaaagggtttcctgcaactgatcgcccaggaatcgccggac
gagcacgcgcagcgcggcggccagccttacccgttcttcctggcacaccagctcaacaac
gatcccgccacgctgggcgagctcgatcgctggcaggtcgaatggaaatacgacggcatg
cgcgcgcaggtcgtgcgccgggagggcagctgggtatggtcgcgcggcgaagacctgatc
accgaacgctttccggaactggcggcgctccggctgccggacggcaccgtggtcgatggc
gaaatcctggtctggcgcgacggcgacgggacggatgcgccggcgccgttcgccgacctg
caaaagcgcatcggccgcaaggcgctgtcggcgaaattcctggccgagtacccggccgtg
ctggtggcgtacgacctgctggagcgcgacggtgtcgacctgcgcaagctgccgcagtgc
gagcgccgcacgctgctcgaacagctggtggcggagatggacacgccgcagttgcgtatt
tcgccgctggtcgaggccgacagctgggaagcgctggcgacgatccgcgaggaatcccgg
atgcgcggcgtggaaggcatgatgctgaaggcgaaggacgcgcaatacggcgtggggcgc
accaaggacgtgggtacctggtggaaatggaagatcgatccctacagcgtggacgcggtg
ctgatctatgcccaggccgggcacggccgccgtgcctcgctgtacaccgactacacgttc
gcggtgtgggacagcgacggcaatggcgggcgccagctggtgccgttcgcgaaagcctat
tcgggactgaccgatgccgagatcacgcaggtggacaacgcggtgcgccgcaccacgatc
gaacgcttcggcccggtgcgcagcgtgcggccgacgatggtgttcgagatcggcttcgag
ggcatccaggcctcgccccggcacaagtccggcatcgcggtgcgctttccccgcatcctg
cgccgccgcgacgacaagtccgtcgaggaagccgatacgctcgacatgctgaaaggcttg
ctggccggggcatcgggcgcatga
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