Meriones unguiculatus (Mongolian gerbil): 110543354
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Entry
110543354 CDS
T05884
Symbol
Col11a2
Name
(RefSeq) collagen alpha-2(XI) chain isoform X1
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Pathway
mun04820
Cytoskeleton in muscle cells
mun04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110543354 (Col11a2)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
110543354 (Col11a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mun00536
]
110543354 (Col11a2)
Glycosaminoglycan binding proteins [BR:
mun00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110543354 (Col11a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_3
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
110543354
NCBI-ProteinID:
XP_021485386
LinkDB
All DBs
Position
16:complement(2830355..2857685)
Genome browser
AA seq
1733 aa
AA seq
DB search
MERCGRCHRLLLLLPLVLGLSAAPGWAGAPSVDVLRALRFPSLPDGVRKSKGVCPADVAY
RVSRPAQLSAPTRQLFPGGFPKDFSLLTVMRTRPGLQAPLLTLYSAQGVQQLGLELGRPV
RFLYEDQRGRPQAPAQPVFRGLSLADGKWHHVAVAVKGQSVTLIVDCKKRVTRPLPRSVH
PVLDTHGVVIFGAHILDDEVFEGDVQELLIVPGVQAAYQSCGQRDLECERAQRDGPQVQK
PHRAQRSPKKQPARLHKPQSQEPQQQPLYYDYEPPYYDVMTTGTAPDYQYPTPGEEEGAL
ESSPLPFLEEEQTDLQVSPTADTFQAEEYGEGGTDTPAGIYDYTYGYGDDYREETELGPA
LSAETAHSGAVAHGPRGLKGEKGEPAVLEPGMFVEGPPGPEGPAGLTGPPGIQGNPGPVG
DPGERGPPGRAGLPGSDGPPGPPGTSLMLPFRFGSSGGDKGPVVAAQEAQAQAVLQQARL
ALRGPPGPMGYTGRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGAD
GARGMPGEPGLKGDRGFDGLPGLPGEKGQRGDTGAQGLPGPPGEDGERGNDGEIGPRGLP
GESGPRGLLGPKGPPGIPGPPGVRGMDGPHGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQ
GAVGPHGEKGPRGKPGLPGMPGSDGLPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVK
GVDGIRGLKGHKGEKGEDGFPGFKGDVGVKGDRGEVGVPGSRGEDGPEGPKGRTGPTGDP
GPPGLTGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGERGPT
GPRGQRGPRGATGKSGAKGTSGGDGPHGPPGERGLPGPQGPNGFPGPKGPPGPAGKDGLP
GHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGESGPMGERGHPGPPGPPGEQGLPGTAGKE
GTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPAGPPGPAGSPGERGAA
GSGGPIGPPGRPGPQGPPGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVAGED
GDKGEVGDPGQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDE
GTRGFNGPPGPIGLQGLPGSPGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGV
GNLGPPGEKGEPGESGSPGLQGEPGVKGPRGERGEKGETGQAGEAGPPGPKGPTGDDGPK
GNPGPVGFPGDPGPPGEAGPRGQDGAKGDQGEDGEPGQPGSPGPTGENGPPGPLGKRGPA
GTPGPEGRQGEKGAKGDPGAVGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRPGAT
GQAGPPGPVGPPGLPGLRGDAGAKGEKGHPGLIGLIGPTGEQGEKGDRGLPGPQGAPGQK
GETGIPGASGPIGPGGPPGLPGPAGPKGAKGATGPAGPKGEKGVQGPPGHPGPPGEVIQP
LPIQMPKKTRRSVDGSQLMQDNEAVPTGGAPGSPAGLEEIFGSLDSLREEIEQMRRPTGT
QDSPARTCQDLKLCHPELPDGEYWVDPNQGCARDAFRVFCNFTAGGETCVTPRDDVTQFS
YVDSEGSPVGVVQLTFLRLLSVSAHQDVSYPCSVVSPDGPLKLRGANEDELSPETSPYVK
EFRDGCQTQQGRTVLEVRTPVLEQLPVLDASFSDLGTPTRRGGVLLGPVCFMG
NT seq
5202 nt
NT seq
+upstream
nt +downstream
nt
atggagcggtgcggccgctgccaccgcctccttctgctcctacctctggtgctggggctg
agcgctgccccaggatgggcaggtgcaccctctgtggacgtgcttcgtgccctgaggttc
ccctcccttccggatggtgtccggaaatcaaaaggggtctgtccagctgatgtggcctac
cgcgtgtcacggcctgcccagctcagcgcgcccacccggcagctcttcccaggaggcttt
cccaaagatttctctctgctgactgttatgcggacccgccctggcctccaggctcccctc
ttgacactatacagtgcccagggggtccagcagctgggtctggagctaggtcgccctgtc
cgctttctctatgaggaccagaggggacggccacaagcccccgctcagcctgtcttccga
ggcctcagcctagcagatggcaagtggcaccacgtggctgtggctgtgaagggtcagtct
gtcaccctcattgtggactgcaagaagcgagtgacccggccccttccccggagcgtgcat
ccggtgttggacacccatggggtggtgatctttggtgcccacatcctagatgatgaagtc
tttgagggtgatgttcaggaactcctcattgtcccaggcgtccaagctgcctatcagtct
tgtggacagagggatctggaatgtgagagggcacagagagatggacctcaggttcagaag
cctcacagagcccagagatctccaaagaagcagccagcaagacttcataagccgcagagc
caggagccccagcagcagcctctctattatgactacgaacccccctattacgatgtgatg
actacggggacggcccctgattaccagtaccccactccaggtgaagaggaaggagccctg
gagtccagtcccttgccattccttgaagaggaacagacagatcttcaggtgtccccaaca
gccgacactttccaggcagaggaatatggggagggtggcacagacacgccagcggggatc
tacgattacacctatggctatggggatgattatcgtgaggagacggagcttggccctgcc
ctctctgcggagacagctcactcaggagccgttgcccatggaccccgggggctaaaggga
gagaagggagagcctgcggtgctggagcctggtatgttcgtagagggaccaccgggccca
gaaggccctgcgggattaactggaccccctggcatccaggggaatccaggcccagttgga
gaccctggtgagaggggcccccctggccgggcagggctccccggatcggatggaccgcct
ggtcctcctggcacttctctgatgctccctttccggtttggcagtagtgggggtgacaag
ggccctgtggtggcagcccaggaggcccaggcccaggcggttctgcagcaggcaaggctg
gccctccgtgggccccctggccccatgggatacacgggccgccctgggcccttggggcag
cctgggagccctggcttgaagggagaatctggagacctgggcccacagggccccagggga
cctcagggcctcacaggccctcctggcaaggctggtcgaaggggccgagcaggtgccgat
ggagcccgtgggatgcctggagaacctggcctgaagggagatagaggttttgatggactt
ccagggctacctggcgagaagggacagaggggtgatacaggtgctcagggccttcccggg
cctcctggcgaggatggagagcggggcaatgatggagagattggaccccgggggctgcct
ggagagtcgggaccccgaggacttcttggccccaaaggtccacctggtattcctggtccc
ccaggagtccgaggcatggatggtccccatggccccaaagggagcttgggaccccaagga
gagccagggcctcctggacaacagggcactccagggacccagggcctccctggacctcag
ggtgccgtcgggcctcatggagagaagggtcctcgagggaaaccaggcctccctggcatg
cctggatcagatggactcccgggtcacccagggaaggaaggtccccccggaaccaaaggg
aaccagggtccctctggtccacagggtcctttaggatacccaggccctcgaggtgtcaag
ggtgtggatggaattcggggcctgaagggccacaagggtgaaaagggcgaggatggcttt
cctgggttcaaaggtgacgtgggcgtgaaaggagacaggggtgaggttggagtccctggt
tccaggggagaagatggccccgaggggccgaaaggacgtactgggcccactggagaccct
ggcccccctgggctcacgggcgagaagggcaagctaggtgttcctggtctgcctggctac
cccggacgccagggtcctaaggggtccctaggttttcctggttttcctggagccagtgga
gagaagggagctcggggcctgtctgggaaatcaggacctcggggagaacggggccccacg
ggtccaaggggtcagcggggaccccgaggtgccaccgggaagtctggagccaagggaaca
tcaggtggtgatggtccccacgggccacccggagagaggggtcttcctggacctcaaggc
cccaatggatttcctggtcccaaaggccctccgggccccgcagggaaggatgggctgcct
ggacacccaggccagagaggagaagtgggattccaaggaaagactggccctccaggaccc
cctggagtggtgggacctcagggagcagctggggaaagcggtcccatgggggagagaggt
caccctggccccccaggacctcctggcgagcaaggactgcctggaacagctggaaaggaa
gggaccaagggtgatcctggcccccctggtgccccagggaaggatggtcctgctggtcta
agaggcttcccaggagagagaggcctcccgggcactgctggtggacctggcttgaaggga
aatgaaggcccagccggccctcctggccctgcaggctctcctggggaacgaggtgcagca
ggatcagggggcccgattggtccgccggggcgtccaggcccacaaggtccccctggagca
gcaggagagaaaggcgtcccgggtgagaagggccccattggtcctactggccgagatggg
gtgcagggccctgtggggcttcctggtcctgcgggcccgccaggtgtggctggagaggat
ggagacaagggtgaggtgggagatccaggacagaagggtaccaaggggaacaagggagaa
catggccctcctggacctcctggtcccatcggtcctgtggggcagccaggagcagcggga
gctgatggggagcctggagctcgggggccccaggggcactttggagccaaaggtgacgaa
ggaacaagaggattcaatgggcccccgggacccattggcctacagggcctgccaggatct
cccggggaaaagggagaaacaggagacgtggggcctatgggaccgcctggccctccagga
ccccgaggccccgctggacccaatggtgctgacggcccacaaggacctcctggaggtgtt
gggaacttgggtccccctggagagaagggtgaacctggggagtcaggctctccaggactc
cagggtgagccgggcgtcaagggtcctcgtggagagcgtggcgagaaaggggagacgggg
caggcgggagaagccggaccaccagggcccaaaggccccacaggcgatgacggccccaag
gggaaccctggtcctgttggctttcctggggaccctggcccccctggagaagctggccca
cggggccaggatggggctaagggagaccaaggagaggacggcgagccagggcagcctgga
tcccctggtcccactggggagaacggaccccctgggccccttggaaagcggggacctgct
ggcactcctggtccagagggacgacaaggagagaagggagcgaagggggaccctggtgct
gtgggggccccaggaaagacaggtcctgtgggtcctgcaggcccagcgggaaagcctggc
cctgatggtcttcgggggctcccgggctcagtgggtcagcaaggccgcccaggagccaca
ggccaggctgggcccccaggtcctgtgggacccccagggcttcctggcctccggggcgat
gctggagccaagggagagaagggtcacccaggtctcatcgggctgattgggccaactgga
gagcaaggagagaagggtgaccggggccttcctggccctcagggcgcccctggacagaag
ggagagacgggtatcccgggagcatctgggcccatcggtcctggagggcctcctggcctg
cctggacccgctggccccaaaggagccaaaggagccacaggcccagctggacccaaggga
gagaagggcgtccagggccctcccggccacccgggccccccaggtgaggtgatccagccc
ctgcccatccagatgcccaagaagacccgccgctccgtggatggaagccaactgatgcag
gacaacgaggcggtgcccacgggcggtgccccgggcagccctgcggggctggaggagatc
ttcggctcactggactccctgcgggaggagatcgagcagatgaggcggcccacggggacc
caggacagccctgcgcgcacctgccaggacctgaagctctgtcaccccgagcttcccgat
ggagagtactgggtggaccccaaccagggctgtgctcgagatgccttcagggtgttctgc
aacttcacagcgggaggggagacttgtgtgacccccagggatgacgtcacacagttctcc
tatgtggactccgagggctctccagtgggtgtggtccagctcaccttcctgcggctgctc
agcgtctctgcccaccaggatgtctcctacccatgctccgtagtatcccctgatggtccg
ctgaaactccggggggccaatgaggatgaactgagccccgagaccagcccttacgtcaag
gagttcagagatggctgtcagacccagcaaggccggacggtgctggaggtgcgcacgcct
gtgctggagcagctgcctgtcctggatgcttccttctcagacctggggacccccacgagg
cggggaggtgtgctgctggggcctgtctgcttcatgggctag
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integrated database retrieval system
