Meriones unguiculatus (Mongolian gerbil): 110551288
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Entry
110551288 CDS
T05884
Symbol
Upf3a
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Pathway
mun03013
Nucleocytoplasmic transport
mun03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110551288 (Upf3a)
03015 mRNA surveillance pathway
110551288 (Upf3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mun03019
]
110551288 (Upf3a)
Messenger RNA biogenesis [BR:
mun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
110551288 (Upf3a)
mRNA cycle factors
P-body specific factors
110551288 (Upf3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
110551288
NCBI-ProteinID:
XP_021497441
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All DBs
Position
4:8677816..8711784
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AA seq
423 aa
AA seq
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MRSEEGPGGLGAALSMRGPSWREKLSGPEVQFRRESPRREPTGPPASPFAESGAGKPREE
KRTALSKVVLRRLPPGLTKEQLEEQLRPLPAHDYFEVVAADLSLYPHLYSRAYINFRNPD
DILLFRDRFDGYIFIGNKGLEYPAVVEFAPFQKIAKKKLKKKDAKTGSIEDDPDYKQFLE
SYSLEEEKTSTSPEILLGEIEAKTRELLARRTTPLLEYIKNRKLEKQRIREEKREERRRR
ELEKKRLREEEKRKRREEERCKRKEADKQKRTEKEVKIKLLKKLETGEESTTEKPKERGE
AIGIGNEKQEARPVENLPEMPGERLQNGSDKEQRDKRFRDKEPETPRCHPDGCRKHSIHS
ELARFSRRSEDESKWGKGFTQDRGKKGSQDGAVLVDMAERMSKDQKEYDSLGPRKERLGN
KVL
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcggaagaggggcccggaggcctgggcgcagccctttctatgcggggcccgagc
tggagggagaagctgtcgggccctgaggtccagttccgccgcgagtcgccgcggagggag
cccacggggccgccggcctcgccttttgccgagagcggggccggcaagcctcgcgaggag
aagaggacggccctgagcaaggtggtcctccggcggctgccccccggcctcaccaaagag
cagctggaagagcaactgcgccccctgcccgcgcacgattacttcgaggtggtagctgcg
gacctcagcctctatcctcacctctactcaagagcatacattaactttagaaaccccgat
gacatccttctgttcagagaccgttttgatggatatatcttcattggcaataaaggcctg
gagtatcctgcagtggtggagtttgctccgttccagaagattgccaaaaagaagttgaag
aaaaaagatgctaagaccggcagcattgaagatgatccagactataagcagtttctggaa
tcctacagtttggaggaagaaaaaaccagcactagtcctgagatacttttgggagagata
gaagcaaagacaagagaacttcttgccagaagaaccacacctcttttggaatatattaaa
aataggaaattagaaaagcagagaatccgagaggaaaaacgtgaagagcggaggaggagg
gagctagaaaagaagcgtttacgggaagaagagaaaaggaaaaggagagaagaggagaga
tgtaaaaggaaagaggcggataaacaaaagagaactgagaaagaggtcaagattaagctt
cttaagaaactggaaacgggagaagaatcaaccacagagaaacccaaagaaagaggtgaa
gccattggcattggaaatgaaaagcaggaagcccggccagtagagaacctgccagagatg
cctggggagaggttacagaatggcagtgacaaagagcaaagggacaaaagatttcgagac
aaagagcctgaaactccaagatgtcacccagatggttgcagaaagcacagcattcactcc
gagcttgccaggttttccagaaggagtgaagatgaatcaaagtgggggaaaggcttcacc
caggatagagggaaaaaagggagtcaggatggggctgtccttgtggacatggcagagaga
atgagcaaggaccagaaggagtatgacagcctgggaccaagaaaggagcgcctgggaaac
aaggttctctag
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