Musa acuminata (wild Malaysian banana): 103977298
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Entry
103977298 CDS
T03447
Name
(RefSeq) protein PAF1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
mus
Musa acuminata (wild Malaysian banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mus03021
]
103977298
Transcription machinery [BR:
mus03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
103977298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
103977298
NCBI-ProteinID:
XP_009391055
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All DBs
Position
3:complement(274408..283763)
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AA seq
730 aa
AA seq
DB search
MASFRPFHPPPPPAAAQPPPPNQSALPPPPTLPPPMNPQFQPYPQHRNYPGSGPAAASAV
SGYGRIPPGSASRHGFAGPFNPPAGQQQPLPPGPQQQYPYAPHLHQAPPPPPPSASYPPP
PPPPHLPPQPQPQPSMSYPSSQYPPHYNLPAQPPPPPPPPSSPPPNPSVPPPPPPPIPPP
SVPPPPPPSSNQSPLVPPDVGQRHQGAREALPPGRQPKLSLPPKQQKPPSAPPAGRASAQ
PGGPNGTSMRVETEEERRLRKRREYEKQKQEEKRQLLLKQSQATVLQKTQMMVSGSARPH
GSITGSRIAERRTTPFLSGERIENRLKKPTTFICKMKFRNDLPDPTAQPKLLAMHKDKDR
YTKYTITSLEKMHKPKLYVEQDLGVPLDLLDMSVYNPSAVRTALSPEDEELLLDDEVVTP
IKQGGIRRKERPTDKGVSWLVKTQYISPISMEAAKMSLTEKQAKEIRESKEGRNLFLENL
NNRDRQIQTIEESFRAAKLPPVHQTKPELEAVDILPLLPDFDRCEDQFVMVNFDGDPTAD
SEQYNKLDRSIRDELESQAIMKSFIANGSDPMNPEKFLAYMVPQPDELYKDLKSENEDTS
YSWVREYHWDVRGDDADDPTTYFVTFGEKDARYLPLPTKLVLQKKKAKEGRSGDEIEQFP
VPSRVTVRKKSTTTYGEPNEYGEASRNNEKLDVRNIKRGRSSMDDDLERQHKFQRTEDID
QFSGEEDMSD
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggcctccttcaggcccttccaccctcccccgccgcctgctgcagcgcagcctcccccg
ccgaaccagagcgctcttccgcctccccctaccctcccgccgcctatgaacccgcagttc
cagccctacccccagcaccgtaactaccctggctccggccccgccgccgcctccgccgtg
tctggttatggccggattccgcccggctcggcctcccgccacggtttcgctggccccttt
aacccccccgccggccagcagcagccgctgccgcccgggccgcagcagcagtatccgtac
gcccctcatcttcatcaggcaccgccaccgccgccaccttcggcctcctatccaccgccc
ccgcctccaccccacctcccaccgcagccgcagccgcagccgtcgatgtcttatccttct
tcccagtaccctcctcactataaccttccggcccagccgcccccaccgccccctccgcct
tcctccccgccgccaaacccttccgtccctcccccaccgccgccccccatcccccctccg
tcagtcccgccccctccccctccttcgtccaaccagtccccgttggtgccaccagacgtg
ggtcaacgtcatcagggcgctagagaggccctgccccctgggaggcagccgaagctatct
ctcccgcccaagcagcagaagcctccttctgcacctcccgctggaagggcttcggcccaa
cctggaggccccaatgggacctcgatgagggtggagaccgaggaggagaggaggttgagg
aaaaggagagagtatgagaagcagaagcaggaggagaagaggcagcttttgctgaagcaa
tcacaagccactgtgctgcaaaagacccagatgatggtgtcaggcagcgcaaggccacat
ggctccatcactgggtcgcgcatagcagagcgccggacaaccccattcctgagtggggaa
aggatcgaaaaccgattgaagaagcctacaactttcatctgcaagatgaagtttagaaat
gacttgccagatccaaccgcacaaccaaagttattagctatgcataaggacaaagaccga
tataccaaatatacaatcacatccttagagaaaatgcacaagcctaaactctatgttgaa
caagatcttggggtacctcttgacctacttgatatgagtgtatacaatccttccgctgtt
cgtactgccctttctcctgaagatgaagagttattgcttgacgacgaggtagtaactcct
atcaagcaaggaggtataagaaggaaagagcgacctacagataaaggtgtttcatggttg
gttaagactcaatacatttctcccatcagcatggaagctgcaaaaatgtctcttactgag
aaacaagcaaaagaaatacgagaatcaaaagaaggtcgaaatcttttcttggagaatctt
aacaatagggatagacaaatacaaaccatcgaagaatctttcagggcagccaaactgccc
cctgtccatcaaacgaagcctgaattagaagctgtggatattttgcctttgttaccagat
tttgaccggtgcgaagaccaatttgttatggtaaattttgatggagatccaactgctgat
tcagaacaatataacaagctagacaggtctatccgtgatgagcttgagtctcaggctata
atgaagagcttcatagccaatggctcagatccaatgaatcctgagaagtttcttgcgtac
atggttcctcaaccggatgagttgtacaaggacttaaaatctgaaaacgaagatacatca
tactcctgggttagagaatatcactgggatgtaagaggtgatgatgctgatgatccaaca
acgtacttcgtaacttttggagaaaaagatgctcgctacttgcccttgcctacaaagctt
gttttacaaaagaagaaggcaaaagagggaaggtctggtgatgagatcgagcagtttcca
gtgccatcaagggtgactgtgaggaagaaatcaactactacatatggagaaccaaacgaa
tatggggaagcatctagaaataatgaaaaactggatgtcaggaacataaagcgaggacgt
tcctcaatggatgatgaccttgaaaggcagcataaatttcagagaacagaagatatagat
cagttcagtggggaggaagatatgtctgattaa
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