Musa acuminata (wild Malaysian banana): 103980411
Help
Entry
103980411 CDS
T03447
Name
(RefSeq) DNA ligase 6 isoform X1
Organism
mus
Musa acuminata (wild Malaysian banana)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DRMBL
DNA_ligase_A_C
UBA_4
RMMBL
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
103980411
NCBI-ProteinID:
XP_009395089
UniProt:
A0A804IJJ4
LinkDB
All DBs
Position
4:complement(607126..629103)
Genome browser
AA seq
1389 aa
AA seq
DB search
MATPPPPFSTSSLFLSSYRSFSAALPSPPPSPPLAFRLLSDGSQLPPVPSDFPLSKLIPR
TRFVVDGFRSAGDFSVSYLLTHFHSDHYAGLGSAWCKGLIFCSATTARLLVEILNVSPFF
VVSLSLGEFTEIDEWEVAAVDANHCPGAVQFLFRTRVCEGQRPERFIHTGDFRFHEQMTL
DPVLCDFVGADAVFLDTTYCNPKFVFPSQEESVEYIVNTVKRFKEQNEGSGESVLFLIAT
YVIGKEKILLEISRRCGCLLQVDNRKMQVLSVLGFAGSGVFTEDASASDIHVIGWNVLGE
TWPYFRPNFVKMKEIMVERGYNKAVGFISTGWLNETKRDGFAVRVKDLLEIHLVPYSEHS
NYNELREYVRFLRPKRVIPTVGMDVEKLDSKHALAMRKHFAGLVDETANKHDFLMAFHRK
SEGADTSAGNDMTGNRNQQEDVDMVDNPTATSIRSCQQSDSQDLHMVNDEEMEGVVEDLQ
DCLPSWVKQDQVLDLLKRSNGDLVSAVSEFFEHETEFYKQANAGNISIASSCKSINTDLE
PLLPLKSVGEAPESGRKNFLDQVKQSTNQNLRLLTPSLAKKRGLGGGNKKKKKAKGCSNL
ESSGGKQSTITNFFRRVASGASSSDTCAVTSNQQITIETYKEELDQFLQIINNGMPRKSA
ALLLEKVRGNIDVAVDMYYSGSSNILENEGNLLSEVVVSGVLVNKCTKKVSNSSEDKISL
PTLYLQGSSREDKTPANVSLPIEKYSPIEHACWKAGEPAPYLHLALTFDLVEQVRGKIKT
TSMLSNMFRSLLALSPGDVLPALYLCTNKIAADHENMELNVGGSLVVTALEEACGMNRSR
IKEMYNTLGDLGDVAQEIRQTQSLLAAPRTLSIHHLFCMLREISMITGTGSAVRRKNLIV
NLMRSCREMEIKFLVRTLVRNLRIGAMMKTILPALAQAVVLNSHSPLQCVGISETTRLQL
QGISAAVAEAYNVLPNLDLLIPSLLSKGIDFSAASLQMTPGTPIPPMLARITNGAMQVLK
LFEGRAFTCEYKYDGQRAQIHRAADGSIRVFSRQMKETTSRFPDLIDTIKESCKHEVSTF
ILDAEVVAVDRKNGGKLMSFQELSSRERGNKDSSIKIDNIRVDICVFIFDIMFCNGERLL
DFPLRQRRKYVKDLFYKEKMGYLEFAKEITVEADEACLNNQNTLSRINLFFKDACKSSCE
GIMVKTLDIDAGYSASKRSEAWLKVKRDYIEGLGDSFDLVPIGAWYGNGRKAGWYSPFLM
ACYNSDTEEYQSICRVMSGFSDSFYLEMKEFFSGERLLLKKPSYYRTDESPDLWFPPELV
WEIRGADLTISPVHHAAVGLVHPSRGISVRLPRYIRSLSDRKSEDCSTAADIACMYKAQT
RKMEVFKED
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atggccactccccctcctcctttctccacatcctccctcttcctctcctcctaccgctcc
ttttccgccgccctcccttcccctccaccctcccctcccctcgccttccgcctcctctcc
gatggctcccagctccctccggtcccctctgacttcccgctctcgaagctaatcccccgg
acccgtttcgtcgtcgacggcttccgctccgccggtgacttctccgtctcctacttgctc
acccacttccactccgaccactacgcgggcctcggcagtgcctggtgcaaaggccttatc
ttttgctccgccaccaccgctcgcctcctcgtcgagatcctcaatgtgtcgcctttcttc
gtcgtctccctgtccttaggcgagttcacggagatcgacgaatgggaggtggccgccgtc
gacgccaatcactgccccggcgctgtccagttccttttcaggacccgtgtctgcgaaggg
cagcgaccggagaggtttatccacacaggtgatttccgtttccatgaacagatgacattg
gaccctgttttatgcgattttgttggcgcggatgctgttttccttgacacaacgtattgc
aaccccaaatttgtcttcccctcacaagaggagtcagtggaatacattgtcaacacagtc
aaaagatttaaggaacaaaatgagggatcaggtgaatcggttctcttcttgatcgcaact
tatgtcatcgggaaagagaagattttgcttgagatttctcgtcggtgtggttgcctactg
caagtggataacaggaagatgcaggttttgtctgttctggggtttgctggttcaggcgtt
tttacggaggatgcttcagccagtgacatccacgtgattggttggaatgtgttgggtgag
acttggccttatttcaggcctaattttgtgaagatgaaggagatcatggttgagagagga
tacaacaaggcggtgggtttcatttcaacagggtggctgaacgagacaaagagggatgga
tttgcagtgagggttaaagatctactcgagattcatctagttccatacagcgaacattca
aactataatgaattaagagaatacgtgaggttcttgaggccaaaacgggtcatcccaact
gtgggaatggatgttgaaaagctagacagcaagcatgctttagccatgaggaagcatttt
gcagggctggttgatgagacagcaaacaagcatgattttctaatggctttccatcggaag
tcagagggtgctgatacaagtgctgggaatgacatgacaggtaacagaaaccagcaagag
gatgtggacatggtggacaatccaactgcaacatcaataaggtcatgccagcaatctgat
tcacaggatctgcatatggtgaatgatgaagaaatggaaggagtagttgaggaccttcaa
gattgcttgccgtcttgggtgaaacaggatcaagttttagatctgctgaaaaggtcaaat
ggggatcttgttagtgcagtttcagaattttttgagcatgaaacagaattctataagcaa
gcaaatgctggtaacatttctattgctagctcttgtaaaagcattaacactgacctcgag
ccgttgcttcctttgaagtctgtcggcgaagcccctgaatctggtagaaagaatttcctt
gatcaagtgaaacagtcaaccaaccaaaatttacgcctgcttactccatctctggccaaa
aaaaggggtttaggtggtggaaacaagaaaaaaaagaaagcaaaaggttgctcaaatcta
gaatcaagtggaggcaaacaatctaccatcacaaattttttcagaagagttgcatcgggt
gcttcttccagtgatacttgtgctgttacttctaatcagcagattactattgaaacatat
aaagaagagttggatcagtttctccagatcataaataatggcatgccaagaaaatctgct
gccttattgctggagaaggttagaggaaatattgacgtagcagttgatatgtattatagt
ggttccagtaatatattagagaatgaggggaatttactctcggaagttgttgtctcaggt
gttcttgtaaataagtgtaccaaaaaggtaagcaattcttctgaagacaaaataagcttg
ccaacattgtatctacagggaagttcaagagaagacaaaactccagctaatgtatcatta
cctattgaaaaatattctccaattgagcatgcatgctggaaagctggagaacctgctccc
tacttgcacctggcactgacttttgatttagtggaacaagtaagaggcaagataaagacc
acatctatgctgagtaatatgttcagaagcttgcttgctttgtctcctggtgatgtgctg
cctgctttatatctgtgcacaaacaagattgctgctgaccatgaaaacatggaactgaat
gttggtggaagtttggttgtaactgcactggaagaggcttgtggcatgaacaggtccaga
atcaaagaaatgtacaacacattaggtgatcttggtgatgtagcacaagaaatccggcaa
actcagtctttacttgctgctcctcgtacactttcaattcatcatttattttgtatgctt
cgagagatcagtatgatcacaggtactggaagtgctgtccggaggaaaaaccttattgta
aatctcatgcgttcctgtagagaaatggaaataaaatttcttgtcagaaccttggttcgt
aatctgcgtattggagccatgatgaagaccattttgccagcactagcacaagcagtggtt
ctgaacagtcactcccccttacaatgtgtgggaatttctgagaccactagattgcagctt
cagggtatttctgcagcagttgctgaggcatacaatgtgcttccgaatttggatttgctt
attccttctcttttgagcaaaggcatagatttttctgcagcttcactgcaaatgacacct
ggcacacctattccacctatgcttgccagaattaccaatggtgctatgcaagtgctgaaa
ttgtttgagggtagagctttcacctgtgaatataaatatgatggtcaaagggctcaaatt
cacagagcagctgatggatctatacgagttttttcccgacaaatgaaggaaacaacttct
agattcccggatttaatagatacaattaaagaatcatgtaaacatgaagtttctactttt
atattggatgcagaggttgttgctgtggatagaaagaatggtgggaaactcatgtctttt
caagaactatcttcacgggagagaggaaataaagattcctcgataaaaattgataacatc
agagttgatatttgcgtgttcatctttgatatcatgttttgcaatggagaacggttgttg
gattttccacttcgtcaaaggaggaagtatgtgaaggatttgttttataaggaaaagatg
ggttacttggagtttgctaaggaaataactgtggaagcagatgaagcatgtctgaataat
caaaacacattgtctagaataaacttatttttcaaagatgcatgtaaatcttcttgtgaa
ggaataatggtgaagactttggatattgatgctggatattctgcatcaaaacgtagtgag
gcatggttaaaggtaaaacgtgattatattgaaggattaggtgacagttttgatcttgtt
cctattggtgcttggtatggaaatggtagaaaagctggatggtacagtcctttccttatg
gcatgctacaattctgatactgaagaatatcaaagtatctgccgtgttatgtctggtttt
tctgattccttctatttagagatgaaggaattcttttctggcgaaagattattgctcaag
aagccatcttactatcgaacagacgagtcacctgatctatggtttccccctgagcttgtg
tgggaaatacgaggcgcagacctcacaatctcaccagttcaccatgctgctgttggctta
gtccacccttctcgaggtatctcagtgagacttccaagatacatacgttctttgtcggac
aggaaatccgaagactgcagcactgcagctgatatcgcctgcatgtacaaggctcaaaca
agaaagatggaggtgttcaaggaagattag
DBGET
integrated database retrieval system