Musa acuminata (wild Malaysian banana): 103988081
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Entry
103988081 CDS
T03447
Name
(RefSeq) ATP-dependent DNA helicase Q-like 4A isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
mus
Musa acuminata (wild Malaysian banana)
Pathway
mus03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103988081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mus03032
]
103988081
03400 DNA repair and recombination proteins [BR:
mus03400
]
103988081
Enzymes [BR:
mus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
103988081
DNA replication proteins [BR:
mus03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
103988081
DNA repair and recombination proteins [BR:
mus03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
103988081
Bloom's syndrome complex (BTR)
103988081
FA (Fanconi anemia) pathway
103988081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
RecQ_Zn_bind
HRDC
ResIII
CIP2A_N
HHH
Motif
Other DBs
NCBI-GeneID:
103988081
NCBI-ProteinID:
XP_009404866
UniProt:
A0A804JHW7
LinkDB
All DBs
Position
6:11948748..11963054
Genome browser
AA seq
1232 aa
AA seq
DB search
MHNRTKLKSANEDKSPKVNWCNHASAFEDFSCQDKFLSSGFLFSLPTQKPQTQKSVDQLL
CTRSIACEVHGSERLQLLQVEKAWKALSSMQLACRNYLIPGLTAPVQNHNKDHLRAPFTD
SSNNVKNVDTSQVFKGPFHENMPSHVNYSSHSRSFPQYDSPHYATDSLLKSTYDKNNNVA
SEMAQVTGAQMQSSATHRVIDDHELVCTAADNLADDKFLDALDDDEILESIDVDQIVMEH
YQVTATPEGFMCKQTPFTPVSSRSCTVIPDENMLPPELHESCIHGSKLALCPEAAIHLQE
MKDQLIAVSNELLDNATELSPPDCENLRQKRLYLNKKIQLLEKYLCSLNLDEERQRSHSM
ASSTTARGFGPENPTNKYMIDPIRFNTQVHLRNETGNCMMWSSPAPSHYTDRFDAAPLER
EVFAPKLQNINYVEGSGDIKWKSLDFPWTKKLEANNRKVFGNHSFRPNQREVINATMSGC
DVFVLMPTGGGKSLTYQLPALISPGITLVVSPLVSLIQDQIMHLLQANIPATYLSASMEW
VEQQEIFRELMSGSCIYKLLYVTPEKIAKSDVLLRHLDSLHSRGSLARIVIDEAHCVSQW
GHDFRPDYQGLGILKQKFPKVPVLALTATATVSVKEDVVQALGLVNCIVFRQSFNRPNLW
YCVIPKTKKCLEDIDKFIKENHFDDCGIIYCLSRMDCEKVAEKLQEFGHKAAFYHGTMDP
LQRSYVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGL
RSSCVLYYNYSDYIRVKHMLTQGMIEQSPLASASRRNSFVSNDRVFETNIENLSRMVSYC
ENETDCRRLLQLIHFGEKFNPDNCKRTCDNCSKLLTWVEKDVTDIAKQMVELVISTGKQY
STSHVLEVYRGSLSQNVKKHRHDNLGLHGAGKHLPKGEASRVIRHLVVEDILVEDVRKSD
IYGSISSVLKVNESKVQRLLSGKQRIILRFPAPAKASKMNKPEGTPAKGSLPMNTMTYDM
GAQSTNEIDLNLSVKLYAALRMLRTALVKEAGEGVMTYHIFGNATLQQISKIIPRTKEEL
LEITGIGKAKVHKYGDRVLETIETTIREYRKTSRNSSSSSNDNADGTKKRRGSAGSEPGA
NDDDFAESTVQSKKRVAKLVNSQNGPADTTSMSAYNGRCIDIDLDGYEMESEDSVPPTRQ
GPPGRVLPQWLTPANQINSRIGGLFKEYAFKK
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgcataacagaactaagttgaagtctgctaatgaagacaaatctcctaaggtcaactgg
tgcaatcatgcatctgcttttgaggatttttcctgtcaagacaaatttttgagctcaggt
tttttgttctctttaccgacacaaaaacctcaaacccagaaaagtgttgatcagttgttg
tgtacaaggtctattgcttgtgaagttcatggaagcgagaggctacaattgttacaagtt
gagaaggcctggaaagctctttcgagcatgcaactggcttgcaggaattacttgatacct
ggtttaactgctccagtacagaaccataacaaagatcatcttcgagctccatttactgac
tcatccaacaatgttaagaatgtggatacttcccaagtatttaaaggcccattccatgaa
aatatgccttctcatgtcaattacagttcacattctagatcattccctcaatatgattca
ccacattatgcaacagactcattgctaaaaagtacttacgataagaacaataatgtagct
tcagaaatggcacaagtaactggagcacaaatgcagagctctgccactcatcgggttatt
gatgaccatgagcttgtgtgtactgctgctgataatcttgctgatgacaagtttttagat
gctcttgatgatgatgaaatattggagagtattgatgttgaccaaatagttatggaacac
tatcaagtaactgccacaccagaaggatttatgtgtaaacagacaccttttaccccagtt
tccagtagaagttgtacggtaatccctgatgaaaacatgttgccaccagaactacatgaa
tcatgtattcatggctccaagctagctctgtgtccagaagctgcaattcatctgcaagag
atgaaggatcagctcattgctgtatcaaatgaacttcttgataatgctactgagcttagt
cctccggactgtgaaaatcttcgtcaaaagcggttatatctgaataagaagatccagctg
cttgagaagtacctttgcagtctaaatctagatgaagaaagacagagatcacattctatg
gcatcatcaactactgcaaggggttttggacctgagaaccccacaaacaaatatatgata
gatcctattaggtttaacacccaggttcatctaagaaatgaaacagggaactgtatgatg
tggagctcacctgccccatcccactatacagataggtttgatgctgcacccttggaaaga
gaagtgtttgctccaaagcttcagaacattaattacgttgaaggatctggagatataaag
tggaaaagtttagattttccatggaccaagaaactcgaggccaacaacagaaaagttttt
ggaaatcactcatttcgtcctaatcaaagagaggtgattaatgcaacaatgagtggatgt
gatgtctttgttttaatgccaactggtggtgggaagagcctgacataccagcttcctgct
ctcatcagccctggaataacattagtagtttcaccgcttgtctcactcatccaagatcag
attatgcatttgttgcaggcaaacattcccgctacttatcttagtgccagtatggaatgg
gttgaacaacaggagatttttcgagaattgatgtctggttcttgcatatacaagctgctg
tatgtcactccagaaaaaattgctaagagtgatgttttattgagacacctggattctcta
cattctcggggatcacttgctagaattgttattgatgaagctcattgtgtaagccagtgg
gggcatgattttaggcccgattatcagggtcttggaattttgaagcagaagtttccaaaa
gtcccagtgctagctttgactgctacagcaactgtcagtgtaaaggaagatgttgtacaa
gctcttgggcttgtgaactgcattgtttttcgacagagtttcaatcgtccaaacttgtgg
tactgtgtaatacccaagacaaagaagtgtttggaggacattgacaaattcatcaaagaa
aatcattttgatgattgtggcatcatctactgtctctcaagaatggactgcgaaaaagtg
gctgaaaagctacaggaatttggacataaagcagcattttaccatgggaccatggaccct
cttcaaagatcatatgtgcagaagcagtggagtaaagatgagatcaacataatttgtgcc
actgtggcatttggaatgggtatcaacaaacctgacgttcgttttgttattcatcattct
cttccaaaatctattgaaggttatcatcaggaatgtggacgtgctggtagagatggttta
cgatcatcttgtgtactgtactacaactatagtgattatattcgtgtcaagcacatgctt
acccaaggcatgattgagcaaagtcccttggcatctgcatcaagacgcaattcgtttgtc
agcaatgatagagtgtttgaaacaaatattgagaacctttcacgcatggttagctattgt
gagaatgaaacagattgcagacgtttactacaactgattcattttggtgaaaagttcaat
ccagacaactgtaaaagaacctgtgataattgttcaaaactgttgacttgggttgagaag
gatgtaactgatatagcaaagcaaatggttgaattagtaatatcaactggaaagcagtat
tcaacatctcatgttctggaagtatacaggggttccctgagccaaaatgttaagaaacat
aggcatgacaatttgggccttcatggagctggaaagcatctgccaaaaggtgaagcatca
agagttattcgtcatttagttgttgaagatatacttgtggaagatgtcaggaaaagtgat
atttatggatccatttcttctgttttaaaggtaaacgagtctaaggtgcaaagacttctc
tctggaaaacaaaggatcatattgaggtttcctgctcctgcaaaggcatctaaaatgaac
aaacctgaagggacaccagcaaagggttcattgccaatgaacacaatgacatatgacatg
ggcgctcaatcaacaaatgaaatcgacctgaatctttctgtcaaactttatgctgcttta
cgtatgctgcgaacagctcttgtaaaagaagctggtgagggggtcatgacatatcacata
tttggaaatgccacattgcagcagattagcaagataataccaagaaccaaagaagaactt
ctcgagatcactggcattggaaaggcaaaggtccataagtacggggatcgtgtgttggaa
actatagaaactacaatcagagagtaccgtaaaacgagtaggaatagcagcagtagcagc
aatgataatgctgatggaacaaagaagcggaggggctcagcaggcagcgaaccaggtgct
aatgatgatgactttgccgaaagcaccgtgcagtcaaaaaaacgagtagcaaaactagta
aacagccaaaatggtccagcagacaccacaagcatgtcagcttataatggtcggtgtata
gatatcgatcttgatggttatgagatggagagtgaggattcagttcctcctacgaggcag
ggaccccctggtcgagttctgcctcaatggttaactccagcaaaccaaatcaacagccgc
ataggtggcctttttaaggaatacgcattcaagaaatag
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