Musa acuminata (wild Malaysian banana): 103988797
Help
Entry
103988797 CDS
T03447
Name
(RefSeq) cyclic nucleotide-gated ion channel 1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
mus
Musa acuminata (wild Malaysian banana)
Pathway
mus04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
103988797
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mus04040
]
103988797
Ion channels [BR:
mus04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
103988797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
103988797
NCBI-ProteinID:
XP_009405710
UniProt:
A0A804JK37
LinkDB
All DBs
Position
6:20427105..20439601
Genome browser
AA seq
667 aa
AA seq
DB search
MRSMQRIYHYMFELLSNIFQYKSIKDSSAEDLKSRKKVLDPQGPFLQKWNKIFVLSCVVA
ISVDPLFFYIPFVNDKDTCVDLDENLVITASVLRSFTDIFYVLHIIFQFRTGFIAPPSRV
FGRGVLVEDFSAIALRYLKSYFLIDILAVIPLPQVVILIIIPKLKGSGSVDAKTLLMYII
ILQYVPRLVRIIPLYVEVTKSAGIIAETAWAGAALNLFLYMLASHVLGACWYFLSIERED
SCWRRACHKHNCTTMFWYCGVKKEESMDFIDGECPIQEENATIFDFGMYLQALQSDIVLL
RNFPEKFFYCFWWGLQNLSSLGQNLQTSTYLGEILFAVFISISGLVLFSLLIGNMQTYLQ
STTVRIEEMRVKRQDAEQWMSHRMLPENLRERIRRHEQYQWQETRGVDEEHLLQNLPKDL
RRDIKRHLCLGLLRRVPMFELMDDQLMDAMCDRLKPILYTENSCIIREGDPVDEMLFIMR
GRLLSVTTNGGRTGFFNSDYLKEGDFCGEELLTWALDPNSSSSLPISTRTVKALSEVEAF
ALAADDLKFVASQFRKLHSKKLRHTFRLYSQQWRTWAACFIQAAWRRYSRKKLEESLHEE
ENRLQAALVKDGTTTPSLGATIYASRFAVNALRALRRNVTRKARLQERMPVMLLQKPPEP
DFTVEEQ
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgagaagcatgcagagaatatatcattatatgtttgaacttctaagcaatatctttcag
tataagtccataaaggattcatctgcagaagatttgaagtctaggaagaaagtactggat
cctcaagggccatttctccagaagtggaataaaatatttgttttatcctgtgtcgtggca
atatctgtagatcctctcttcttctacattccatttgttaatgataaggatacctgcgtt
gatttggatgaaaatttggtgatcacagcaagtgtcttgcgatccttcaccgacattttt
tacgtacttcatataatattccaatttcgaactggttttattgctccaccatctcgtgta
tttggaaggggtgtcttggtcgaagacttttcagcaatagcccttagatatttgaagtca
tacttccttattgacattcttgccgttattcctctccctcaggttgttatattgatcata
ataccaaagctaaaagggtcaggttcggtggacgcaaagacgctgttgatgtacattatc
attttacaatatgtgcctaggcttgttagaataataccattgtatgttgaagtcacaaaa
tctgctggtataattgctgaaactgcatgggctggagctgctttgaacctttttctctat
atgcttgcaagtcatgtacttggggcatgctggtacttcctttctattgaacgagaagat
tcttgttggagacgtgcctgccataaacataattgtacaactatgttctggtactgtgga
gttaaaaaggaagaaagcatggattttatagatggtgagtgtcctattcaagaagaaaat
gcaacaatctttgacttcggcatgtaccttcaggctcttcaatcagatattgttcttcta
agaaactttccggaaaagttcttttattgcttttggtggggcttacaaaatctgagttcc
ctgggacaaaatttgcaaacaagcacttacctgggggagattttatttgctgttttcatc
tccatttctgggctggttttgttttcacttcttatcggcaacatgcagacttatctgcaa
tctaccactgtgagaatagaagaaatgagagtgaaaaggcaagatgcagagcaatggatg
tcccaccggatgcttccagagaatctgagggagcgaatacgccgtcatgaacaataccaa
tggcaagaaacaagaggggttgatgaagagcatctgcttcaaaatctacctaaggaccta
agaagggacataaaacgtcatctctgtttgggactgctgaggagggttcccatgtttgaa
ttaatggacgatcaacttatggatgccatgtgtgaccgtctgaaaccaatcctttacact
gaaaacagctgcattattcgtgaaggggacccggtggatgagatgctcttcatcatgaga
ggaagactgcttagtgttacaacaaatggtggcagaacagggtttttcaattcggattac
ctgaaggaaggcgacttctgcggcgaagagcttctgacatgggctttggatcccaactca
tcttcgagcctccccatctccacaaggacggtgaaggcattgtctgaggttgaggctttt
gctctagccgccgatgacttgaaatttgttgcctcccagttcaggaagctgcacagtaag
aagctgaggcataccttcagattatattctcagcagtggagaacatgggctgcttgcttt
atacaggcagcttggcgacgctactcaagaaagaaactggaggaatctctacacgaggag
gagaacaggctgcaggcagcccttgtgaaggatggaactaccacaccgagccttggtgca
acaatctatgcatcaaggtttgcggtgaacgcattacgtgccttgaggcgaaacgtaact
cgtaaggccaggttacaggagaggatgcctgtaatgttgttgcagaagccaccagaacct
gactttactgtggaagaacagtag
DBGET
integrated database retrieval system
