KEGG   Mycobacterium vanbaalenii: Mvan_2025Help
Entry
Mvan_2025         CDS       T00449                                 

Definition
(GenBank) DNA ligase I, ATP-dependent Dnl1
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mva  Mycobacterium vanbaalenii
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:mva00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    Mvan_2025
   03410 Base excision repair
    Mvan_2025
   03420 Nucleotide excision repair
    Mvan_2025
   03430 Mismatch repair
    Mvan_2025
Enzymes [BR:mva01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Mvan_2025
    6.5.1.6  DNA ligase (ATP or NAD+)
     Mvan_2025
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     Mvan_2025
DNA replication proteins [BR:mva03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    Mvan_2025
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     Mvan_2025
DNA repair and recombination proteins [BR:mva03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Mvan_2025
   NER (nucleotide excision repair)
    Other NER factors
     Mvan_2025
   MMR (mismatch exicision repair)
    Other MMR factors
     Mvan_2025
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
JGI: 
UniProt: 
LinkDB All DBs
Position
complement(2165517..2167121)
Genome map
AA seq 534 aa AA seqDB search
MLLVDVANASADVAAMSARLAKVARIAELLRTAGRQGDARLVRVVVSWLSGELTQRQIGV
GWRSVRSVPDPAAQPSLTVEDVDARFGEIGSTSGKGSQARRAALLAELFAAATAVEQVFL
RRLLTGELRQGALGGVMADAVGKAAGVPSAVVRRAAMLGGDLPAVAAAAVTDGESALAQF
TLQVGRPVGPMLAQTATGVADALDRFGGTALFEAKLDGARVQIHRRGDAVSVFTRSLDDV
TARLPEVVDATLALPVTELIADAEAIALRPDGRPHRFQITASRFGRRGGTPDAGTQRLSV
FFFDLLHADGVDLLDLPTGERIATLDATVPREQRVDRLLTSDPEAAQAFLDATLAAGHEG
VMAKSPTAPYEAGRRGAGWLKVKPVHTLDLVVLAVEWGSGRRTGKLSNIHLGARDPATGG
FVMLGKTFKGMTDEMLAWQTERFLELADGAAPAATADHGAAPAATADHGAADGFTVTVRP
EQVVEIAFDGIQTSSRYPGGMALRFARVLCYRDDKTAAEADTIDTVRALHERAN
NT seq 1605 nt NT seq  +upstreamnt  +downstreamnt
gtgctgctggttgacgttgccaacgcgtccgccgacgtcgcggccatgtcggcgcggctg
gccaaggtcgcgcgcatcgccgagctgctgcgcacggccggccgacagggcgacgcgcgg
ctcgtccgcgtcgtcgtgtcctggctgtccggcgagctgacccagcgccagatcggtgtc
gggtggcggtccgtgcgctcggtgcccgaccccgccgcccaaccgagcctcacggtcgag
gacgtcgacgcccggttcggggagatcgggtccacctccggcaaggggtcccaggcgcgc
cgcgcggcactgctggctgaactcttcgctgcggccaccgccgtcgaacaggttttcctg
cgccgcctgctcaccggggaactgcgccagggcgccctcggcggggtgatggccgacgcg
gtcggcaaggccgcgggcgtcccctccgccgtggtgcgtcgcgccgcgatgctgggcggg
gaccttcccgcggtcgccgccgcggccgtcaccgacggcgagtccgccctcgcacaattc
accctgcaggtcggcaggccggtgggcccgatgctggcccagaccgccaccggcgtcgcc
gatgcgctcgaccgcttcggcgggacggcgctgttcgaggccaagctggacggcgcgcgc
gtgcagatccaccgccgcggcgacgcggtgtcggtcttcacccgcagcctcgacgacgtg
acggcgcggctgcccgaggtggtcgacgcgacgctggcgctgccggtcacggagctgatc
gccgatgccgaggcgatcgcactcagacccgacgggcgtccgcaccggttccagatcacc
gcctcacgcttcggccgccgcggtggtacgcccgacgcgggtacacagaggctgtcggtg
ttcttcttcgacctgctgcacgccgacggggtcgacctgctcgacctgcccaccggcgag
cgcatcgccacgctcgacgcgacggtgccccgcgagcagcgcgtcgaccgcctgttgacc
tccgacccggaggccgcgcaggcgtttctcgacgcgacactggccgcgggacacgaaggc
gtgatggccaagtcgccgaccgcaccgtacgaagccggtcgacgcggggcgggctggctc
aaggtcaaacccgtgcacaccctcgacctggtggtgctcgccgtggaatggggatcgggc
cggcgcaccggcaagctgtccaatatccatctcggtgcacgcgacccggcgaccggcggt
ttcgtcatgctcggcaagacgttcaagggcatgaccgatgagatgctggcctggcagacg
gaacgctttctcgagttggccgacggagcggccccggccgcgacagcagaccacggagcg
gccccggccgcgacagcagaccacggagcggcggatggattcaccgtgacggtgcggccg
gagcaggtcgtcgagatcgcgttcgacggaatccagacgtcctcgcgttaccccggtggg
atggcgctgcgcttcgcccgggtgctgtgctaccgcgacgacaagaccgcagccgaggcc
gacaccatcgacacggtgcgtgcactgcacgaacgcgcgaactga

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