Mycolicibacterium vanbaalenii: Mvan_3350
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Entry
Mvan_3350 CDS
T00449
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
mva
Mycolicibacterium vanbaalenii
Pathway
mva03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Mvan_3350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mva03400
]
Mvan_3350
DNA repair and recombination proteins [BR:
mva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mvan_3350
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Mvan_3350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_22
AAA_16
AAA_5
AAA_19
DUF87
Helicase_RecD
UB2H
AAA_7
AIG1
HEM4
DUF6716
Motif
Other DBs
NCBI-ProteinID:
ABM14147
UniProt:
A1TAE7
LinkDB
All DBs
Position
complement(3565461..3567629)
Genome browser
AA seq
722 aa
AA seq
DB search
MAFATEHPVLAHSEYRPVDEVVRSGARFEVVSEFEPAGDQPAAIDELERRIRAGEKDVVL
LGATGTGKSATTAWLIERLQRPTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQ
PEAYIAQTDTYIEKDSSINDDVERLRHSATSNLLSRRDVVVVASVSCIYGLGTPQSYMDR
SVELKVGDEVPRDGLLRLLVDVQYTRNDMAFTRGTFRVRGDTVEIIPSYEELAVRIEFFG
DEIEELYYLHPLTGDIIRKVDSLRIFPATHYVAGPERMAQAISTIEAELEERLAELEGQG
KLLEAQRLRMRTNYDIEMMRQVGFCSGIENYSRHIDGRPAGSAPATLLDYFPEDFLLVID
ESHVTVPQIGGMYEGDMSRKRNLVDFGFRLPSAVDNRPLTWEEFADRIGQTVYLSATPGS
YELSQSGGEFVEQVIRPTGLVDPQVVVKPTKGQIDDLIGEIRKRTERDERVLVTTLTKKM
AEDLTDYLLEMGIRVRYLHSEVDTLRRVELLRQLRLGEYDVLVGINLLREGLDLPEVSLV
AILDADKEGFLRSPRSLIQTIGRAARNVSGEVHMYADKMTDSMKQAIDETERRRAKQTAY
NKEHGIDPKPLRKKIADILDQVYREADDTEAAESVPIGGSGRNASRGRRAQGEPGRAVSA
GVFEGRDTSNMPRAELADLIKDLTAQMMAAARDLQFELAARIRDEIADLKKELRGMDAAG
LK
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggctttcgcgaccgaacaccccgtgctcgcgcattcggagtatcgccccgtcgacgag
gtggtgcgtagcggtgcgcgcttcgaggtggtcagtgaattcgaaccggccggagaccag
cccgccgcgatcgacgagctggagcgccggatccgggcgggcgagaaggacgtggtgctg
ctcggcgccaccggtacgggaaaatccgcgaccacggcatggctgatcgagcgacttcag
cgtcccaccctggtgatggccccgaacaagaccctggccgcgcagctcgccaatgagctc
cgggagatgctgccgcacaacgccgtcgagtacttcgtgtcgtactacgactactaccag
cccgaggcgtacatcgcgcagaccgatacctacatcgagaaggacagctcgatcaacgac
gacgtggagcggttgcgccactcggcgacgtcgaatctgctgtcgcgccgcgacgtggtc
gtggtggcgtcggtgtcgtgcatctacggtctgggcacgccgcagtcctacatggaccgc
tcggtcgagctcaaggtcggcgatgaggtgccccgggatgggctgctcaggctgctggtc
gatgtccagtacacccgcaacgacatggcgttcacccgcggcacgttccgggtccgtggc
gacaccgtcgagatcatcccgtcgtacgaggagctcgcggtgcgcatcgagttcttcggc
gacgagatcgaagagctctactacctgcacccgctgaccggcgacatcatccgcaaggtc
gactcgctgcggatcttccccgccacccactacgtcgccgggcccgagcggatggcccag
gcgatctcgaccatcgaggccgaactcgaagagcggctggccgagctggaagggcagggc
aagctgctggaggcgcagcggctccggatgcgcaccaactacgacatcgagatgatgcgc
caggtcgggttctgctccggcatcgagaattactcccgccacatcgacggcaggcccgca
ggctcggcgcctgcgacgctgctggactatttcccggaagacttcctgctcgtcatcgac
gagtcccacgtgaccgtcccgcagatcggcggcatgtacgaaggcgacatgtcccgtaaa
cgcaacctcgtcgatttcggtttccggttgccgtcggcggtggacaaccggccgctgacg
tgggaggagttcgccgaccggatcgggcagacggtgtacctgtcggcgacacccggatcc
tatgagctcagccagtccgggggtgagttcgtcgagcaggtcatccgcccgaccggcctg
gtggacccgcaggtggtcgtcaagccgaccaagggccagatcgacgacctgatcggcgag
atccgcaaacgcaccgaacgcgatgagcgggttctggtgaccacgctgaccaagaagatg
gccgaggatctcaccgactatctgctggagatggggatcagggtccgctacctgcattcg
gaggtcgacacgctgcgccgggtggagctgctgcgccagctgcggctgggggagtacgac
gtgctggtgggcatcaacctgctgcgtgagggtctcgacctgcccgaggtgtcgctggtg
gccatcctcgacgccgacaaggaaggcttcctgcgctcgccgcgcagcctgatccagacc
atcggccgtgccgcccgcaacgtctccggcgaggtgcacatgtacgccgacaagatgacc
gactcgatgaagcaggccatcgacgagacagagcggcgccgcgcgaagcagaccgcctac
aacaaagagcacggcatcgacccgaaaccgttgcgcaagaagatcgccgacatcctcgat
caggtgtaccgcgaggctgatgatactgaagccgccgagtccgtcccgatcggcgggtcc
ggccgcaacgcctcccgaggcaggcgagcccagggcgagccgggccgggcggtcagcgcc
ggggtgttcgagggccgggacaccagcaacatgccgcgtgccgagctcgccgatctgatc
aaggacctcaccgcgcagatgatggcggcggcgcgcgacctgcagttcgagctggcagcg
cggatccgcgacgaaatcgccgacctgaagaaggaattgcgcggcatggatgccgccgga
ctcaaatga
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