Microterricola viridarii: AWU67_03035
Help
Entry
AWU67_03035 CDS
T04252
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mvd
Microterricola viridarii
Pathway
mvd03420
Nucleotide excision repair
mvd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mvd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AWU67_03035
03430 Mismatch repair
AWU67_03035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mvd03400
]
AWU67_03035
Enzymes [BR:
mvd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AWU67_03035
DNA repair and recombination proteins [BR:
mvd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AWU67_03035
MMR (mismatch excision repair)
Other MMR factors
AWU67_03035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AMB60302
UniProt:
A0A109QXQ1
LinkDB
All DBs
Position
671032..674328
Genome browser
AA seq
1098 aa
AA seq
DB search
MGAAALALALELPPPTPEQIAVIEAPPGGQAIVVAGAGSGKTETMANRVVWLLANGHAAV
PEVLGLTFTRKAAGELAVRIRERVEQLVQAGIADVKIDIFETASVSTYNSFASAIYRENA
MLIGREPDAVVLGEASAWQLARQVVSDTADPRLVEIDKRLDAVTGGVLTLSRSLAENVVD
VRDVHAMVRDFTDMADLPIGGTGRKKTPHASFTSALEAVGGLPPLLDLAERFQAEKRRRG
FVEFSDQVALALEVCERNPAVTAGYRERYKAVLLDEYQDTSVVQTRLLAALFGGHGVMAV
GDPDQSIYGWRGASAANLARFSRDFRGSGDDAAEAERFELSISWRNPRAVLAAANEIVRP
FTIQEGEAQPGDTPPKSPLTAPSFASDGLLDVSFTETVEDEAAAVAEWFAQRLGQGTGKA
DGTKRSAAMLCRSLGKISVFTEALRERGVPFHVLGLAGLLDQPVIVDLVSALRVLHDPSR
GSELLRVLAGARWNIGPKDLHALGKLAGELAQRDHSLAKLSDEVRARLRGSVADDEGRSI
VDALDFLVTAREGHGLVRGFSEVGLARLKEAGDQLIGLRRRAGLELLDLVTLVQQELLLD
IEVAANGIRPLGGASLEAFDELVSGFLAASEHSSLGAFLGWLEEAEQRDRLAPRQEEPEP
GTVQILTIHGSKGLEWDVVAVPRMVVDEMPGKPRSTLGWLAFAELPFEFKGDAAELPELA
WRGVHDQTQFDESVTDFKEQNAAHFAAEQRRLAYVAVTRTKSELLLSGSWWWGQKGARGP
SMFLRELAVAGLIDPELLPGSPEEAENPRSEHSVPPEWPLHPLGVRGQAVLNAAALTQTA
VDSGSGAPIPERLRAEIDALLEERRRRMQGRAALALPTRIPASRFKDFIADPAAVAEQLR
RPMPQRPYRATRLGTLFHSWVEQRSSAVPSGDTLDAGLFELEGIDLDSFGDDAAGDSLFE
SELVGSELEGTEAEQFARLRATFEASPWAGLAPEDVEVEIHLVLDAQVFICKLDAVYRTA
QGYQIVDWKTGKAPKNAADLALKQTQLALYRLAYSRWKGVPVEQIDAVFYFVADDVVIAP
EHLAGEHELLELWAGVTA
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atcggtgccgccgcgctggcgctggcgctggagctgccgccgcccacgcccgagcagatc
gcggtgatcgaggcgccgccgggcggccaggccatcgtcgtcgccggcgcgggcagcggc
aagactgagaccatggccaaccgagtcgtctggctgctcgccaacggccacgccgcggtg
ccagaggtgctcggcctcaccttcacccgcaaggcagccggcgaactggccgtgcgcatc
cgggaacgggtggagcagctcgtgcaggccggcatcgccgacgtgaagatcgacatcttc
gagacggcatccgtgtcgacctacaactccttcgccagcgcgatctaccgcgagaacgcg
atgctgatcggccgggaaccggatgcggtcgtgctcggcgaggcctccgcctggcagctg
gcacggcaggtggtcagcgacaccgccgacccacggctggtcgagatcgacaaacggctc
gacgccgtcaccggcggcgtgctcaccctgagccggtcgctcgccgagaacgtcgtcgac
gtgcgcgacgtgcacgcgatggtgcgcgacttcaccgacatggccgacctgccgatcggc
ggaacggggcgcaagaagaccccgcacgcgagcttcacgagcgcgctggaggcggtcggt
gggctgccgcccctgctcgacctggccgagcgcttccaggccgagaagcgccgccgcggc
ttcgtcgagttctccgaccaggtcgccctcgccctcgaggtgtgtgagcgcaacccggcc
gtcaccgccggctaccgcgagcggtacaaggccgtgctgctcgacgagtaccaagacacc
agcgtggtgcagacccggctgcttgccgccctcttcggcgggcacggcgtgatggccgtc
ggcgaccccgaccagtcgatctacggatggcgcggcgccagcgccgccaacctggcccgt
ttctcgcgcgacttccgcgggtcaggagacgacgccgcagaggcggagcgcttcgaactg
tccatcagctggcgcaacccgcgcgcggtgctggccgcggcgaacgagatcgtgcgaccg
ttcacgattcaggagggcgaggcgcagccgggggacaccccaccgaagagcccgctcact
gcgcccagcttcgcctccgacggactgctcgacgtcagcttcaccgagaccgtcgaagac
gaggcagccgcggtcgcggagtggttcgcccagcggctgggccagggcacgggcaaggcc
gacggcacaaagcgctccgcggcgatgctctgccgcagcctcggcaagatcagcgtgttc
accgaggcgctgcgcgagcgcggcgtgccgttccacgtgctcggcctggccgggctgctg
gaccagcccgtcatcgtcgacctcgtctcggccctgcgggttctgcatgaccccagccgc
gggtcggagctgctgcgcgtgctcgccggggcgcgctggaacatcggaccgaaagacctg
cacgcgctcggcaaactggccggggagctcgcccagcgcgaccacagcctggccaagctc
agcgacgaggtgcgcgcccgcctgcggggcagcgtcgccgacgacgagggccgctcgatc
gtggatgccctcgacttcctggtcaccgcccgcgagggccacggcctagtgcgcggcttc
agcgaggtcgggctggcacggctgaaggaggccggcgaccagttgatcgggctgcgccgg
cgggccgggctggaactgctcgacctcgtcaccctggtgcagcaggagctgctgctcgac
atcgaggtcgctgccaacggcatccgcccgctcggtggcgccagcttggaggcgttcgac
gaactggtcagcggcttcctcgccgccagcgagcacagctcgctcggcgccttcctcggc
tggctggaggaggcggagcagcgtgaccggctcgccccacggcaggaggagccggagccc
ggcaccgtgcagatcctcaccatccacggctcgaaggggctggaatgggacgtcgtcgcc
gtgccgcgcatggtcgtcgacgagatgccgggcaaaccgcgcagcaccctgggctggctg
gcgttcgccgagctgccgttcgagttcaagggtgatgcggccgagctgcccgagctggcc
tggcgcggtgtgcacgaccagacccagttcgatgagtccgtcaccgacttcaaggagcag
aacgccgcccacttcgccgcggagcagcgccgactggcctacgtcgccgtgacccgcacc
aagagtgagttgctgctgagcggatcttggtggtggggccagaagggcgcgcgcgggccg
agcatgttcctgcgcgagctcgccgtcgccgggctgatcgacccggagctgctgccgggc
tcgccggaggaggcagagaacccccgctccgagcacagcgtgccgcccgagtggccgctg
cacccgctcggcgtgcgcggccaggccgtgctgaacgccgctgcactcactcagacggcg
gtcgacagtgggtccggtgcgccgatccctgagcggctgcgcgccgagatcgacgccctg
ctcgaggaacgacgtcgaaggatgcaggggcgggcggcgctcgcgctgccgacgcgcatc
ccggcctcccgtttcaaggacttcatcgccgacccggcggccgtcgccgagcagctgcgc
cgccccatgccgcagcggccctaccgggcgacccggctcggcacgctgttccacagctgg
gtggagcagcgctccagcgcggttccgagcggggacaccctcgacgccgggctgttcgag
ctggagggcatcgacctggacagcttcggcgacgatgctgccggggactctcttttcgag
tccgagctggtgggcagcgagttggagggaacggaggccgagcagttcgcccggctgcgc
gccaccttcgaggcgtcgccgtgggccgggctcgccccggaggacgtcgaggtcgagatc
cacctggtgctggacgcccaggtgttcatctgcaaactcgacgccgtctaccgcacggcg
caggggtaccagatcgtcgactggaagaccggcaaggcgccgaaaaacgcggccgacctg
gcgctcaagcagacccagcttgcgctctaccggctggcctactcacgctggaagggagta
ccggtagagcagatcgacgctgttttctacttcgtcgccgacgacgtcgtgatcgcgccg
gagcatctcgccggtgagcacgagctgctcgagctctgggcgggcgtcaccgcgtag
DBGET
integrated database retrieval system
